SILENT_MODE BLOCK_FILE jp_Jm1ODNj.concise.blc MAX_NSEQ 325 MAX_INPUT_LEN 327 OUTPUT_FILE jp_Jm1ODNj.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 534 314 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 315 534 324 H SPACE SUB_CHARS 1 315 534 324 E SPACE SUB_CHARS 1 315 534 324 - SPACE STRAND 5 318 9 COLOUR_TEXT_REGION 5 318 9 318 51 STRAND 16 318 26 COLOUR_TEXT_REGION 16 318 26 318 51 STRAND 29 318 37 COLOUR_TEXT_REGION 29 318 37 318 51 STRAND 212 318 212 COLOUR_TEXT_REGION 212 318 212 318 51 STRAND 219 318 222 COLOUR_TEXT_REGION 219 318 222 318 51 STRAND 295 318 296 COLOUR_TEXT_REGION 295 318 296 318 51 STRAND 301 318 301 COLOUR_TEXT_REGION 301 318 301 318 51 STRAND 353 318 355 COLOUR_TEXT_REGION 353 318 355 318 51 STRAND 364 318 366 COLOUR_TEXT_REGION 364 318 366 318 51 STRAND 441 318 443 COLOUR_TEXT_REGION 441 318 443 318 51 STRAND 451 318 458 COLOUR_TEXT_REGION 451 318 458 318 51 STRAND 464 318 470 COLOUR_TEXT_REGION 464 318 470 318 51 STRAND 475 318 482 COLOUR_TEXT_REGION 475 318 482 318 51 HELIX 40 318 48 COLOUR_TEXT_REGION 40 318 48 318 50 HELIX 57 318 58 COLOUR_TEXT_REGION 57 318 58 318 50 HELIX 66 318 81 COLOUR_TEXT_REGION 66 318 81 318 50 HELIX 88 318 114 COLOUR_TEXT_REGION 88 318 114 318 50 HELIX 129 318 139 COLOUR_TEXT_REGION 129 318 139 318 50 HELIX 146 318 162 COLOUR_TEXT_REGION 146 318 162 318 50 HELIX 184 318 211 COLOUR_TEXT_REGION 184 318 211 318 50 HELIX 234 318 272 COLOUR_TEXT_REGION 234 318 272 318 50 HELIX 369 318 376 COLOUR_TEXT_REGION 369 318 376 318 50 HELIX 383 318 393 COLOUR_TEXT_REGION 383 318 393 318 50 HELIX 404 318 430 COLOUR_TEXT_REGION 404 318 430 318 50 HELIX 497 318 505 COLOUR_TEXT_REGION 497 318 505 318 50 HELIX 513 318 523 COLOUR_TEXT_REGION 513 318 523 318 50 STRAND 5 323 9 COLOUR_TEXT_REGION 5 323 9 323 51 STRAND 19 323 26 COLOUR_TEXT_REGION 19 323 26 323 51 STRAND 29 323 37 COLOUR_TEXT_REGION 29 323 37 323 51 STRAND 219 323 222 COLOUR_TEXT_REGION 219 323 222 323 51 STRAND 272 323 273 COLOUR_TEXT_REGION 272 323 273 323 51 STRAND 278 323 279 COLOUR_TEXT_REGION 278 323 279 323 51 STRAND 295 323 296 COLOUR_TEXT_REGION 295 323 296 323 51 STRAND 300 323 302 COLOUR_TEXT_REGION 300 323 302 323 51 STRAND 318 323 319 COLOUR_TEXT_REGION 318 323 319 323 51 STRAND 352 323 356 COLOUR_TEXT_REGION 352 323 356 323 51 STRAND 364 323 367 COLOUR_TEXT_REGION 364 323 367 323 51 STRAND 441 323 443 COLOUR_TEXT_REGION 441 323 443 323 51 STRAND 451 323 458 COLOUR_TEXT_REGION 451 323 458 323 51 STRAND 465 323 470 COLOUR_TEXT_REGION 465 323 470 323 51 STRAND 475 323 482 COLOUR_TEXT_REGION 475 323 482 323 51 STRAND 517 323 523 COLOUR_TEXT_REGION 517 323 523 323 51 HELIX 42 323 48 COLOUR_TEXT_REGION 42 323 48 323 50 HELIX 66 323 82 COLOUR_TEXT_REGION 66 323 82 323 50 HELIX 88 323 114 COLOUR_TEXT_REGION 88 323 114 323 50 HELIX 129 323 138 COLOUR_TEXT_REGION 129 323 138 323 50 HELIX 147 323 161 COLOUR_TEXT_REGION 147 323 161 323 50 HELIX 184 323 212 COLOUR_TEXT_REGION 184 323 212 323 50 HELIX 234 323 265 COLOUR_TEXT_REGION 234 323 265 323 50 HELIX 268 323 271 COLOUR_TEXT_REGION 268 323 271 323 50 HELIX 369 323 375 COLOUR_TEXT_REGION 369 323 375 323 50 HELIX 383 323 392 COLOUR_TEXT_REGION 383 323 392 323 50 HELIX 406 323 430 COLOUR_TEXT_REGION 406 323 430 323 50 HELIX 497 323 505 COLOUR_TEXT_REGION 497 323 505 323 50 STRAND 5 324 9 COLOUR_TEXT_REGION 5 324 9 324 51 STRAND 15 324 25 COLOUR_TEXT_REGION 15 324 25 324 51 STRAND 29 324 34 COLOUR_TEXT_REGION 29 324 34 324 51 STRAND 210 324 213 COLOUR_TEXT_REGION 210 324 213 324 51 STRAND 220 324 223 COLOUR_TEXT_REGION 220 324 223 324 51 STRAND 295 324 297 COLOUR_TEXT_REGION 295 324 297 324 51 STRAND 441 324 442 COLOUR_TEXT_REGION 441 324 442 324 51 STRAND 452 324 458 COLOUR_TEXT_REGION 452 324 458 324 51 STRAND 464 324 470 COLOUR_TEXT_REGION 464 324 470 324 51 STRAND 474 324 481 COLOUR_TEXT_REGION 474 324 481 324 51 HELIX 36 324 48 COLOUR_TEXT_REGION 36 324 48 324 50 HELIX 53 324 60 COLOUR_TEXT_REGION 53 324 60 324 50 HELIX 67 324 81 COLOUR_TEXT_REGION 67 324 81 324 50 HELIX 88 324 114 COLOUR_TEXT_REGION 88 324 114 324 50 HELIX 130 324 140 COLOUR_TEXT_REGION 130 324 140 324 50 HELIX 146 324 162 COLOUR_TEXT_REGION 146 324 162 324 50 HELIX 185 324 202 COLOUR_TEXT_REGION 185 324 202 324 50 HELIX 205 324 209 COLOUR_TEXT_REGION 205 324 209 324 50 HELIX 233 324 271 COLOUR_TEXT_REGION 233 324 271 324 50 HELIX 369 324 377 COLOUR_TEXT_REGION 369 324 377 324 50 HELIX 383 324 394 COLOUR_TEXT_REGION 383 324 394 324 50 HELIX 403 324 430 COLOUR_TEXT_REGION 403 324 430 324 50 HELIX 496 324 505 COLOUR_TEXT_REGION 496 324 505 324 50 HELIX 512 324 524 COLOUR_TEXT_REGION 512 324 524 324 50