SILENT_MODE BLOCK_FILE jp_TiqChZ2.concise.blc MAX_NSEQ 834 MAX_INPUT_LEN 836 OUTPUT_FILE jp_TiqChZ2.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 279 823 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 824 279 833 H SPACE SUB_CHARS 1 824 279 833 E SPACE SUB_CHARS 1 824 279 833 - SPACE STRAND 5 827 10 COLOUR_TEXT_REGION 5 827 10 827 51 STRAND 80 827 85 COLOUR_TEXT_REGION 80 827 85 827 51 STRAND 110 827 113 COLOUR_TEXT_REGION 110 827 113 827 51 STRAND 150 827 157 COLOUR_TEXT_REGION 150 827 157 827 51 STRAND 182 827 187 COLOUR_TEXT_REGION 182 827 187 827 51 STRAND 193 827 199 COLOUR_TEXT_REGION 193 827 199 827 51 HELIX 16 827 28 COLOUR_TEXT_REGION 16 827 28 827 50 HELIX 35 827 48 COLOUR_TEXT_REGION 35 827 48 827 50 HELIX 64 827 73 COLOUR_TEXT_REGION 64 827 73 827 50 HELIX 89 827 105 COLOUR_TEXT_REGION 89 827 105 827 50 HELIX 118 827 142 COLOUR_TEXT_REGION 118 827 142 827 50 HELIX 161 827 176 COLOUR_TEXT_REGION 161 827 176 827 50 HELIX 206 827 226 COLOUR_TEXT_REGION 206 827 226 827 50 HELIX 235 827 244 COLOUR_TEXT_REGION 235 827 244 827 50 HELIX 247 827 260 COLOUR_TEXT_REGION 247 827 260 827 50 STRAND 5 832 9 COLOUR_TEXT_REGION 5 832 9 832 51 STRAND 80 832 86 COLOUR_TEXT_REGION 80 832 86 832 51 STRAND 110 832 113 COLOUR_TEXT_REGION 110 832 113 832 51 STRAND 150 832 157 COLOUR_TEXT_REGION 150 832 157 832 51 STRAND 182 832 188 COLOUR_TEXT_REGION 182 832 188 832 51 STRAND 193 832 198 COLOUR_TEXT_REGION 193 832 198 832 51 HELIX 16 832 27 COLOUR_TEXT_REGION 16 832 27 832 50 HELIX 35 832 48 COLOUR_TEXT_REGION 35 832 48 832 50 HELIX 64 832 72 COLOUR_TEXT_REGION 64 832 72 832 50 HELIX 89 832 105 COLOUR_TEXT_REGION 89 832 105 832 50 HELIX 117 832 142 COLOUR_TEXT_REGION 117 832 142 832 50 HELIX 162 832 177 COLOUR_TEXT_REGION 162 832 177 832 50 HELIX 206 832 225 COLOUR_TEXT_REGION 206 832 225 832 50 HELIX 235 832 244 COLOUR_TEXT_REGION 235 832 244 832 50 HELIX 247 832 260 COLOUR_TEXT_REGION 247 832 260 832 50 STRAND 4 833 10 COLOUR_TEXT_REGION 4 833 10 833 51 STRAND 79 833 85 COLOUR_TEXT_REGION 79 833 85 833 51 STRAND 110 833 113 COLOUR_TEXT_REGION 110 833 113 833 51 STRAND 150 833 155 COLOUR_TEXT_REGION 150 833 155 833 51 STRAND 157 833 157 COLOUR_TEXT_REGION 157 833 157 833 51 STRAND 182 833 186 COLOUR_TEXT_REGION 182 833 186 833 51 STRAND 194 833 200 COLOUR_TEXT_REGION 194 833 200 833 51 HELIX 16 833 28 COLOUR_TEXT_REGION 16 833 28 833 50 HELIX 36 833 48 COLOUR_TEXT_REGION 36 833 48 833 50 HELIX 64 833 73 COLOUR_TEXT_REGION 64 833 73 833 50 HELIX 89 833 105 COLOUR_TEXT_REGION 89 833 105 833 50 HELIX 120 833 131 COLOUR_TEXT_REGION 120 833 131 833 50 HELIX 135 833 142 COLOUR_TEXT_REGION 135 833 142 833 50 HELIX 161 833 176 COLOUR_TEXT_REGION 161 833 176 833 50 HELIX 206 833 226 COLOUR_TEXT_REGION 206 833 226 833 50 HELIX 236 833 244 COLOUR_TEXT_REGION 236 833 244 833 50 HELIX 247 833 259 COLOUR_TEXT_REGION 247 833 259 833 50