QUERY                  : EIIRKLMDAKKFLLDGYIDEGVKIVLEITKSSTKSEYNWFICNLLESIDCRYMFQVLDKIGSYFDLDKCQNLKSVVECGVINNTLNEHVNKALDILVIQGKRDKLEEIGREILNEVSASILVAIANALRRVGDERDATTLLIEACKKGEKEACNAVNTL : QUERY 
UniRef90_H2C2E9        : ELQKSLMEAKERIVNGDVKQGTELIGKVVNSSNIREANWVICNIIDAAECKYVVETLESIGKIFDITTCGNLKRVITCHAMRGVLNEYVDIALGALVKRRREDLLDRLAQELMN-ADPKFLVKLASAYGELGNTRKQGDLLRVACEKGLTEACRNINQV : UniRef90_H2C2E9
UniRef90_A4YGL9        : ELVKSLMEAKESIISGDVKRGVEIIEKTVNSSNIKEANWVICNVIDAADCAYVVETLNAIGKIFDVTACGNLKRVISCFMRAGKDSEFVDLALSALVQKRREDQLDKILAETG-EIPAPLLLKLASAYGKIGNRKKEQELLKQACEKGLKEACRDINQI : UniRef90_A4YGL9
UniRef90_F4G279        : ELLKSLMEAKERILSGDVKQGVEIIGKNVNSSNIKESNWVICNVIDAADCQYVVETLESIGKIFDITVCGNLKRVVECYAKRSLDSEFVDLALTSLVEKRKLDQLDKVILGL-NDSLPSLLVKLASAYAKLGNKKMEEELLKRACEKGLKEACRNINQV : UniRef90_F4G279
UniRef90_F4B9J0        : -----MTEAKERIIDGYVKQGIELIEKTVSSNNISQANWVICNIIDAAKCEYLVEVLDSIGKIFDISVCGNVKRVISCYAKVGKYSEFVDIAINSIVNRGKKDQLDKVLNDVGN--NGEFLYKLSLAYEKLHDLKKAQELRKKACDSGIPEACENINQV : UniRef90_F4B9J0
UniRef90_A0A031LLF9    : ELIKSLTEAKELILDGYLKQGIDLIEKTVTSDNIKESNWVICNIIDAVPCQNLVTVLDNIGKMFDISVCGNVKRVISCYSKVNKYNELVDIAIDSIVQKRKVEQLDKVLQELGN--NGMIYYKLALAYEKLNYSKKAQELKKKACENGIAEACQNINQV : UniRef90_A0A031LLF9
UniRef90_W7KJC6        : QLFKSLTYAKELIINGHTKEGIEVIEKAVNSSNIKEANWVICNIIDAASCNAVVSVLDSIGKIFDISACGNVKRVIKCYDSAKRDSEFVDIAINALIARGKKDQLDKLLPEL---TYGKILLKLSQVYAKFKEEKKARELMKKACEQGEKEACENINQL : UniRef90_W7KJC6
UniRef90_Q97ZD6        : ELRRKLIEAKRLILDGFVEQGIELLSKTISPENIKESNWIICNIIDTANCDAVVKTLDSIGKIFDISPCANIKRVVYCYALMNKMSEYVDLALDVIVKANKKDSLDKLYNDLKNEINPEFLLKIGTAYKKLNAVRESNEVLRKACENGVKEACENIKEI : UniRef90_Q97ZD6
UniRef90_M1IWN6        : DTLKKLMDAKKLLSDGIIEEGDKIIKELAKSSPRDEYNWFICNIVDTISCDTLFVVLEDIGSNFDLSKCQNLRTIINCGIKLNINSKYFDMALDYLTAQGKKEQLEDISKNLLNEPKPEIVIKIANALKKIGSTREANDLMNEACKRGIKDACASV--- : UniRef90_M1IWN6
UniRef90_UPI00036C17E5 : ---KSLLHIKESLFLKKREEAFEELRRVLKEPSDADVNWFGCNVIDVADCETLVQFHLEFGNRFDLRNCMNLNKLATC-LASKVDVKVLAPIVKTVIAQGRGNKLIEAA----SSSNYETIKALVDALELIGERNLATSVLNSACRGGVKEACE----- : UniRef90_UPI00036C17E5
UniRef90_Q96XS7        : --------------------------------------WSICK---ETNCKTIIRYSK---KSQDYLKCKNLVRFVECFAKADEEFLFVQ-----TISKMKKSELEKISN---SDLPAKYYYLLSQFY-----LDKRAELLMRACKDGYRQAC------ : UniRef90_Q96XS7

                       : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151------ :
OrigSeq                : EIIRKLMDAKKFLLDGYIDEGVKIVLEITKSSTKSEYNWFICNLLESIDCRYMFQVLDKIGSYFDLDKCQNLKSVVECGVINNTLNEHVNKALDILVIQGKRDKLEEIGREILNEVSASILVAIANALRRVGDERDATTLLIEACKKGEKEACNAVNTL : OrigSeq

Jnet                   : -HHHHHHHHHHHHH---HHHHHHHHHH-----------EEEE-EEE----HHHHHHHHHH----------HHHHHHHHHHH----HHHHHHHHHHHHHH---HHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH--- : Jnet
jhmm                   : -HHHHHHHHHHHHH---HHHHHHHHHHH---------EEEE---EEE---HHHHHHHHHH----------HHHHHHHHHHH-----HHHHHHHHHHHHHH---HHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-- : jhmm
jpssm                  : -HHHHHHHHHHHHH---HHHHHHHHHH-----------EEEEEEEE----HHHHHHHHHH-----------HHHHHHHHHH----HHHHHHHHHHHHHH--HHHHHHHHHHH------HHHHHHHHHHHHH--HHHHHHHHHHHHH-HHHHHHHHH--- : jpssm

Lupas 14               : --------------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21               : --------------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28               : --------------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 28

Jnet_25                : --B--BB-BB--BB---B--BB-BB--BB-------BBBBBBBBB--B-B-BBB-BB--BB--B-B--B--B--BB-BBB-----B-BBB-BB-BBB-------B--BB--B-----B-BBBBBB-BB--B-----B--BB--BB---B--BB--B--- : Jnet_25
Jnet_5                 : -----B--B---B-------B---B---------------BB-BB----B--BB-B---B--------B--B--BB-B----------B--BB--B--------B--B-----------BB--BB-BB--B--------B---BB------BB------ : Jnet_5
Jnet_0                 : --------------------B------------------B------------B---------------------BB-B-------------B----------------------------B--B---------------------------B------- : Jnet_0
Jnet Rel               : 638999998677505753566776650077777777715781226114661112345653343677654236889999885067118999999999874061199999986147887214688999998743478999999987523138888741299 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.