SILENT_MODE BLOCK_FILE jp_eKgagsW.concise.blc MAX_NSEQ 890 MAX_INPUT_LEN 892 OUTPUT_FILE jp_eKgagsW.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 436 879 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 880 436 889 H SPACE SUB_CHARS 1 880 436 889 E SPACE SUB_CHARS 1 880 436 889 - SPACE STRAND 38 883 40 COLOUR_TEXT_REGION 38 883 40 883 51 STRAND 51 883 56 COLOUR_TEXT_REGION 51 883 56 883 51 STRAND 77 883 80 COLOUR_TEXT_REGION 77 883 80 883 51 STRAND 90 883 95 COLOUR_TEXT_REGION 90 883 95 883 51 STRAND 124 883 130 COLOUR_TEXT_REGION 124 883 130 883 51 STRAND 189 883 196 COLOUR_TEXT_REGION 189 883 196 883 51 STRAND 261 883 266 COLOUR_TEXT_REGION 261 883 266 883 51 STRAND 286 883 288 COLOUR_TEXT_REGION 286 883 288 883 51 STRAND 322 883 326 COLOUR_TEXT_REGION 322 883 326 883 51 STRAND 330 883 335 COLOUR_TEXT_REGION 330 883 335 883 51 STRAND 361 883 365 COLOUR_TEXT_REGION 361 883 365 883 51 STRAND 378 883 381 COLOUR_TEXT_REGION 378 883 381 883 51 STRAND 415 883 418 COLOUR_TEXT_REGION 415 883 418 883 51 STRAND 426 883 433 COLOUR_TEXT_REGION 426 883 433 883 51 HELIX 4 883 21 COLOUR_TEXT_REGION 4 883 21 883 50 HELIX 23 883 30 COLOUR_TEXT_REGION 23 883 30 883 50 HELIX 60 883 70 COLOUR_TEXT_REGION 60 883 70 883 50 HELIX 103 883 118 COLOUR_TEXT_REGION 103 883 118 883 50 HELIX 146 883 158 COLOUR_TEXT_REGION 146 883 158 883 50 HELIX 163 883 176 COLOUR_TEXT_REGION 163 883 176 883 50 HELIX 178 883 184 COLOUR_TEXT_REGION 178 883 184 883 50 HELIX 217 883 227 COLOUR_TEXT_REGION 217 883 227 883 50 HELIX 235 883 244 COLOUR_TEXT_REGION 235 883 244 883 50 HELIX 268 883 281 COLOUR_TEXT_REGION 268 883 281 883 50 HELIX 296 883 314 COLOUR_TEXT_REGION 296 883 314 883 50 HELIX 343 883 355 COLOUR_TEXT_REGION 343 883 355 883 50 HELIX 384 883 391 COLOUR_TEXT_REGION 384 883 391 883 50 HELIX 396 883 402 COLOUR_TEXT_REGION 396 883 402 883 50 HELIX 406 883 412 COLOUR_TEXT_REGION 406 883 412 883 50 STRAND 38 888 40 COLOUR_TEXT_REGION 38 888 40 888 51 STRAND 51 888 56 COLOUR_TEXT_REGION 51 888 56 888 51 STRAND 77 888 80 COLOUR_TEXT_REGION 77 888 80 888 51 STRAND 91 888 95 COLOUR_TEXT_REGION 91 888 95 888 51 STRAND 124 888 129 COLOUR_TEXT_REGION 124 888 129 888 51 STRAND 189 888 196 COLOUR_TEXT_REGION 189 888 196 888 51 STRAND 261 888 266 COLOUR_TEXT_REGION 261 888 266 888 51 STRAND 286 888 288 COLOUR_TEXT_REGION 286 888 288 888 51 STRAND 322 888 326 COLOUR_TEXT_REGION 322 888 326 888 51 STRAND 331 888 335 COLOUR_TEXT_REGION 331 888 335 888 51 STRAND 361 888 365 COLOUR_TEXT_REGION 361 888 365 888 51 STRAND 378 888 381 COLOUR_TEXT_REGION 378 888 381 888 51 STRAND 415 888 418 COLOUR_TEXT_REGION 415 888 418 888 51 STRAND 426 888 433 COLOUR_TEXT_REGION 426 888 433 888 51 HELIX 4 888 20 COLOUR_TEXT_REGION 4 888 20 888 50 HELIX 23 888 31 COLOUR_TEXT_REGION 23 888 31 888 50 HELIX 60 888 70 COLOUR_TEXT_REGION 60 888 70 888 50 HELIX 103 888 118 COLOUR_TEXT_REGION 103 888 118 888 50 HELIX 146 888 158 COLOUR_TEXT_REGION 146 888 158 888 50 HELIX 163 888 173 COLOUR_TEXT_REGION 163 888 173 888 50 HELIX 175 888 184 COLOUR_TEXT_REGION 175 888 184 888 50 HELIX 217 888 226 COLOUR_TEXT_REGION 217 888 226 888 50 HELIX 235 888 244 COLOUR_TEXT_REGION 235 888 244 888 50 HELIX 268 888 281 COLOUR_TEXT_REGION 268 888 281 888 50 HELIX 296 888 314 COLOUR_TEXT_REGION 296 888 314 888 50 HELIX 343 888 355 COLOUR_TEXT_REGION 343 888 355 888 50 HELIX 383 888 391 COLOUR_TEXT_REGION 383 888 391 888 50 HELIX 396 888 402 COLOUR_TEXT_REGION 396 888 402 888 50 HELIX 406 888 412 COLOUR_TEXT_REGION 406 888 412 888 50 STRAND 38 889 40 COLOUR_TEXT_REGION 38 889 40 889 51 STRAND 51 889 56 COLOUR_TEXT_REGION 51 889 56 889 51 STRAND 76 889 80 COLOUR_TEXT_REGION 76 889 80 889 51 STRAND 90 889 95 COLOUR_TEXT_REGION 90 889 95 889 51 STRAND 124 889 130 COLOUR_TEXT_REGION 124 889 130 889 51 STRAND 189 889 195 COLOUR_TEXT_REGION 189 889 195 889 51 STRAND 260 889 265 COLOUR_TEXT_REGION 260 889 265 889 51 STRAND 322 889 326 COLOUR_TEXT_REGION 322 889 326 889 51 STRAND 330 889 335 COLOUR_TEXT_REGION 330 889 335 889 51 STRAND 361 889 365 COLOUR_TEXT_REGION 361 889 365 889 51 STRAND 377 889 381 COLOUR_TEXT_REGION 377 889 381 889 51 STRAND 415 889 418 COLOUR_TEXT_REGION 415 889 418 889 51 STRAND 427 889 433 COLOUR_TEXT_REGION 427 889 433 889 51 HELIX 4 889 21 COLOUR_TEXT_REGION 4 889 21 889 50 HELIX 23 889 30 COLOUR_TEXT_REGION 23 889 30 889 50 HELIX 59 889 71 COLOUR_TEXT_REGION 59 889 71 889 50 HELIX 103 889 118 COLOUR_TEXT_REGION 103 889 118 889 50 HELIX 146 889 158 COLOUR_TEXT_REGION 146 889 158 889 50 HELIX 163 889 176 COLOUR_TEXT_REGION 163 889 176 889 50 HELIX 178 889 184 COLOUR_TEXT_REGION 178 889 184 889 50 HELIX 217 889 227 COLOUR_TEXT_REGION 217 889 227 889 50 HELIX 235 889 243 COLOUR_TEXT_REGION 235 889 243 889 50 HELIX 268 889 281 COLOUR_TEXT_REGION 268 889 281 889 50 HELIX 297 889 314 COLOUR_TEXT_REGION 297 889 314 889 50 HELIX 343 889 355 COLOUR_TEXT_REGION 343 889 355 889 50 HELIX 384 889 392 COLOUR_TEXT_REGION 384 889 392 889 50 HELIX 396 889 402 COLOUR_TEXT_REGION 396 889 402 889 50 HELIX 406 889 412 COLOUR_TEXT_REGION 406 889 412 889 50