SILENT_MODE BLOCK_FILE jp_JZ9MEPW.concise.blc MAX_NSEQ 207 MAX_INPUT_LEN 209 OUTPUT_FILE jp_JZ9MEPW.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 64 196 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 197 64 206 H SPACE SUB_CHARS 1 197 64 206 E SPACE SUB_CHARS 1 197 64 206 - SPACE STRAND 5 200 6 COLOUR_TEXT_REGION 5 200 6 200 51 STRAND 15 200 19 COLOUR_TEXT_REGION 15 200 19 200 51 STRAND 23 200 30 COLOUR_TEXT_REGION 23 200 30 200 51 STRAND 36 200 43 COLOUR_TEXT_REGION 36 200 43 200 51 STRAND 49 200 54 COLOUR_TEXT_REGION 49 200 54 200 51 STRAND 59 200 62 COLOUR_TEXT_REGION 59 200 62 200 51 STRAND 15 205 19 COLOUR_TEXT_REGION 15 205 19 205 51 STRAND 23 205 30 COLOUR_TEXT_REGION 23 205 30 205 51 STRAND 36 205 43 COLOUR_TEXT_REGION 36 205 43 205 51 STRAND 49 205 54 COLOUR_TEXT_REGION 49 205 54 205 51 STRAND 60 205 62 COLOUR_TEXT_REGION 60 205 62 205 51 STRAND 4 206 6 COLOUR_TEXT_REGION 4 206 6 206 51 STRAND 15 206 18 COLOUR_TEXT_REGION 15 206 18 206 51 STRAND 22 206 29 COLOUR_TEXT_REGION 22 206 29 206 51 STRAND 36 206 43 COLOUR_TEXT_REGION 36 206 43 206 51 STRAND 50 206 55 COLOUR_TEXT_REGION 50 206 55 206 51 STRAND 59 206 63 COLOUR_TEXT_REGION 59 206 63 206 51