SILENT_MODE BLOCK_FILE jp_BussubS.concise.blc MAX_NSEQ 738 MAX_INPUT_LEN 740 OUTPUT_FILE jp_BussubS.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 451 727 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 728 451 737 H SPACE SUB_CHARS 1 728 451 737 E SPACE SUB_CHARS 1 728 451 737 - SPACE STRAND 30 731 32 COLOUR_TEXT_REGION 30 731 32 731 51 STRAND 84 731 85 COLOUR_TEXT_REGION 84 731 85 731 51 STRAND 213 731 214 COLOUR_TEXT_REGION 213 731 214 731 51 STRAND 264 731 267 COLOUR_TEXT_REGION 264 731 267 731 51 STRAND 327 731 330 COLOUR_TEXT_REGION 327 731 330 731 51 STRAND 365 731 366 COLOUR_TEXT_REGION 365 731 366 731 51 STRAND 396 731 397 COLOUR_TEXT_REGION 396 731 397 731 51 STRAND 439 731 442 COLOUR_TEXT_REGION 439 731 442 731 51 HELIX 2 731 23 COLOUR_TEXT_REGION 2 731 23 731 50 HELIX 46 731 56 COLOUR_TEXT_REGION 46 731 56 731 50 HELIX 60 731 72 COLOUR_TEXT_REGION 60 731 72 731 50 HELIX 88 731 96 COLOUR_TEXT_REGION 88 731 96 731 50 HELIX 98 731 101 COLOUR_TEXT_REGION 98 731 101 731 50 HELIX 105 731 119 COLOUR_TEXT_REGION 105 731 119 731 50 HELIX 151 731 165 COLOUR_TEXT_REGION 151 731 165 731 50 HELIX 172 731 187 COLOUR_TEXT_REGION 172 731 187 731 50 HELIX 221 731 230 COLOUR_TEXT_REGION 221 731 230 731 50 HELIX 236 731 255 COLOUR_TEXT_REGION 236 731 255 731 50 HELIX 281 731 291 COLOUR_TEXT_REGION 281 731 291 731 50 HELIX 300 731 318 COLOUR_TEXT_REGION 300 731 318 731 50 HELIX 356 731 364 COLOUR_TEXT_REGION 356 731 364 731 50 HELIX 371 731 388 COLOUR_TEXT_REGION 371 731 388 731 50 HELIX 415 731 426 COLOUR_TEXT_REGION 415 731 426 731 50 STRAND 30 736 32 COLOUR_TEXT_REGION 30 736 32 736 51 STRAND 84 736 86 COLOUR_TEXT_REGION 84 736 86 736 51 STRAND 133 736 134 COLOUR_TEXT_REGION 133 736 134 736 51 STRAND 212 736 215 COLOUR_TEXT_REGION 212 736 215 736 51 STRAND 264 736 265 COLOUR_TEXT_REGION 264 736 265 736 51 STRAND 273 736 274 COLOUR_TEXT_REGION 273 736 274 736 51 STRAND 327 736 330 COLOUR_TEXT_REGION 327 736 330 736 51 STRAND 395 736 398 COLOUR_TEXT_REGION 395 736 398 736 51 STRAND 439 736 442 COLOUR_TEXT_REGION 439 736 442 736 51 HELIX 2 736 23 COLOUR_TEXT_REGION 2 736 23 736 50 HELIX 46 736 56 COLOUR_TEXT_REGION 46 736 56 736 50 HELIX 60 736 72 COLOUR_TEXT_REGION 60 736 72 736 50 HELIX 87 736 101 COLOUR_TEXT_REGION 87 736 101 736 50 HELIX 105 736 119 COLOUR_TEXT_REGION 105 736 119 736 50 HELIX 150 736 165 COLOUR_TEXT_REGION 150 736 165 736 50 HELIX 172 736 186 COLOUR_TEXT_REGION 172 736 186 736 50 HELIX 220 736 231 COLOUR_TEXT_REGION 220 736 231 736 50 HELIX 236 736 254 COLOUR_TEXT_REGION 236 736 254 736 50 HELIX 281 736 291 COLOUR_TEXT_REGION 281 736 291 736 50 HELIX 300 736 318 COLOUR_TEXT_REGION 300 736 318 736 50 HELIX 355 736 366 COLOUR_TEXT_REGION 355 736 366 736 50 HELIX 370 736 388 COLOUR_TEXT_REGION 370 736 388 736 50 HELIX 415 736 426 COLOUR_TEXT_REGION 415 736 426 736 50 STRAND 30 737 32 COLOUR_TEXT_REGION 30 737 32 737 51 STRAND 45 737 47 COLOUR_TEXT_REGION 45 737 47 737 51 STRAND 197 737 198 COLOUR_TEXT_REGION 197 737 198 737 51 STRAND 230 737 230 COLOUR_TEXT_REGION 230 737 230 737 51 STRAND 263 737 268 COLOUR_TEXT_REGION 263 737 268 737 51 STRAND 341 737 341 COLOUR_TEXT_REGION 341 737 341 737 51 STRAND 360 737 366 COLOUR_TEXT_REGION 360 737 366 737 51 STRAND 439 737 442 COLOUR_TEXT_REGION 439 737 442 737 51 HELIX 3 737 22 COLOUR_TEXT_REGION 3 737 22 737 50 HELIX 60 737 71 COLOUR_TEXT_REGION 60 737 71 737 50 HELIX 99 737 100 COLOUR_TEXT_REGION 99 737 100 737 50 HELIX 106 737 120 COLOUR_TEXT_REGION 106 737 120 737 50 HELIX 173 737 187 COLOUR_TEXT_REGION 173 737 187 737 50 HELIX 238 737 255 COLOUR_TEXT_REGION 238 737 255 737 50 HELIX 281 737 292 COLOUR_TEXT_REGION 281 737 292 737 50 HELIX 299 737 317 COLOUR_TEXT_REGION 299 737 317 737 50 HELIX 371 737 388 COLOUR_TEXT_REGION 371 737 388 737 50 HELIX 415 737 426 COLOUR_TEXT_REGION 415 737 426 737 50