QUERY           : CELYHYQECVRGTTVILKEPCPSGTYEGNSPFHPLADNKFALTCTSTHFAFACADGTRHTYQLRARSV : QUERY 
UniRef90_P59635 : CELYHYQECVRGTTVLLKEPCPSGTYEGNSPFHPLADNKFALTCTSTHFAFACADGTRHTYQLRARSV : UniRef90_P59635
UniRef90_E0XIZ8 : -ELYHYQECARGTTVLLKEPCQPNTYEGNSPYHPLADNKFAITCTNTKFSFVCQDETRHVFQLRARSI : UniRef90_E0XIZ8
UniRef90_Q5DIB9 : CELYHYQECVRGTTVLLKEPCPSGTYEGNSPF------------------------------------ : UniRef90_Q5DIB9

                : 1---------11--------21--------31--------41--------51--------61------ :
OrigSeq         : CELYHYQECVRGTTVILKEPCPSGTYEGNSPFHPLADNKFALTCTSTHFAFACADGTRHTYQLRARSV : OrigSeq

Jnet            : ----HHHHH----EEEE----------------------EEEEE----EEEEE-----EEEEEE---- : Jnet
jhmm            : ---HHHHHH----EEEE----------------------EEEEE----EEEEE-----HHHHHHH--- : jhmm
jpssm           : -----HHHHHH--EEEE----------------------EEEEE----EEEEEE---EEEEEEEE--- : jpssm

Lupas 14        : -------------------------------------------------------------------- : Lupas 14
Lupas 21        : -------------------------------------------------------------------- : Lupas 21
Lupas 28        : -------------------------------------------------------------------- : Lupas 28

Jnet_25         : --BB-B--BB-BBBBBB---B------B--BBB-B----BBBBBB---BBBBB---B--BB-B----- : Jnet_25
Jnet_5          : --------B------BB----------------------B-B-B----B-B-B--------------- : Jnet_5
Jnet_0          : ----------------------------------------------------B--------------- : Jnet_0
Jnet Rel        : 99920254414021444057777677777766677777358985488568997168722222111799 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.