SILENT_MODE BLOCK_FILE jp_txlE7X7.concise.blc MAX_NSEQ 855 MAX_INPUT_LEN 857 OUTPUT_FILE jp_txlE7X7.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 115 844 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 845 115 854 H SPACE SUB_CHARS 1 845 115 854 E SPACE SUB_CHARS 1 845 115 854 - SPACE STRAND 27 848 28 COLOUR_TEXT_REGION 27 848 28 848 51 STRAND 42 848 48 COLOUR_TEXT_REGION 42 848 48 848 51 STRAND 70 848 74 COLOUR_TEXT_REGION 70 848 74 848 51 STRAND 90 848 96 COLOUR_TEXT_REGION 90 848 96 848 51 HELIX 9 848 21 COLOUR_TEXT_REGION 9 848 21 848 50 HELIX 29 848 38 COLOUR_TEXT_REGION 29 848 38 848 50 HELIX 54 848 66 COLOUR_TEXT_REGION 54 848 66 848 50 HELIX 77 848 84 COLOUR_TEXT_REGION 77 848 84 848 50 HELIX 100 848 113 COLOUR_TEXT_REGION 100 848 113 848 50 STRAND 26 853 29 COLOUR_TEXT_REGION 26 853 29 853 51 STRAND 42 853 48 COLOUR_TEXT_REGION 42 853 48 853 51 STRAND 70 853 74 COLOUR_TEXT_REGION 70 853 74 853 51 STRAND 90 853 95 COLOUR_TEXT_REGION 90 853 95 853 51 HELIX 10 853 22 COLOUR_TEXT_REGION 10 853 22 853 50 HELIX 30 853 39 COLOUR_TEXT_REGION 30 853 39 853 50 HELIX 54 853 66 COLOUR_TEXT_REGION 54 853 66 853 50 HELIX 77 853 84 COLOUR_TEXT_REGION 77 853 84 853 50 HELIX 100 853 113 COLOUR_TEXT_REGION 100 853 113 853 50 STRAND 27 854 27 COLOUR_TEXT_REGION 27 854 27 854 51 STRAND 43 854 48 COLOUR_TEXT_REGION 43 854 48 854 51 STRAND 70 854 74 COLOUR_TEXT_REGION 70 854 74 854 51 STRAND 90 854 96 COLOUR_TEXT_REGION 90 854 96 854 51 HELIX 8 854 21 COLOUR_TEXT_REGION 8 854 21 854 50 HELIX 28 854 38 COLOUR_TEXT_REGION 28 854 38 854 50 HELIX 56 854 65 COLOUR_TEXT_REGION 56 854 65 854 50 HELIX 77 854 84 COLOUR_TEXT_REGION 77 854 84 854 50 HELIX 101 854 113 COLOUR_TEXT_REGION 101 854 113 854 50