SILENT_MODE
BLOCK_FILE jp_77B53GZ.concise.blc
MAX_NSEQ 159
MAX_INPUT_LEN 161
OUTPUT_FILE jp_77B53GZ.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 265 148   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 149 265 158 H SPACE
SUB_CHARS 1 149 265 158 E SPACE
SUB_CHARS 1 149 265 158 - SPACE
STRAND 30 152 36
COLOUR_TEXT_REGION 30 152 36 152 51
STRAND 41 152 48
COLOUR_TEXT_REGION 41 152 48 152 51
STRAND 53 152 59
COLOUR_TEXT_REGION 53 152 59 152 51
STRAND 102 152 111
COLOUR_TEXT_REGION 102 152 111 152 51
STRAND 126 152 126
COLOUR_TEXT_REGION 126 152 126 152 51
STRAND 154 152 164
COLOUR_TEXT_REGION 154 152 164 152 51
STRAND 171 152 174
COLOUR_TEXT_REGION 171 152 174 152 51
STRAND 193 152 196
COLOUR_TEXT_REGION 193 152 196 152 51
STRAND 214 152 215
COLOUR_TEXT_REGION 214 152 215 152 51
STRAND 230 152 238
COLOUR_TEXT_REGION 230 152 238 152 51
STRAND 252 152 258
COLOUR_TEXT_REGION 252 152 258 152 51
HELIX 73 152 95
COLOUR_TEXT_REGION 73 152 95 152 50
HELIX 176 152 186
COLOUR_TEXT_REGION 176 152 186 152 50
HELIX 200 152 205
COLOUR_TEXT_REGION 200 152 205 152 50
STRAND 30 157 36
COLOUR_TEXT_REGION 30 157 36 157 51
STRAND 41 157 48
COLOUR_TEXT_REGION 41 157 48 157 51
STRAND 53 157 59
COLOUR_TEXT_REGION 53 157 59 157 51
STRAND 102 157 111
COLOUR_TEXT_REGION 102 157 111 157 51
STRAND 153 157 164
COLOUR_TEXT_REGION 153 157 164 157 51
STRAND 172 157 174
COLOUR_TEXT_REGION 172 157 174 157 51
STRAND 193 157 196
COLOUR_TEXT_REGION 193 157 196 157 51
STRAND 214 157 216
COLOUR_TEXT_REGION 214 157 216 157 51
STRAND 230 157 238
COLOUR_TEXT_REGION 230 157 238 157 51
STRAND 252 157 258
COLOUR_TEXT_REGION 252 157 258 157 51
HELIX 73 157 95
COLOUR_TEXT_REGION 73 157 95 157 50
HELIX 176 157 186
COLOUR_TEXT_REGION 176 157 186 157 50
HELIX 200 157 205
COLOUR_TEXT_REGION 200 157 205 157 50
STRAND 31 158 35
COLOUR_TEXT_REGION 31 158 35 158 51
STRAND 42 158 48
COLOUR_TEXT_REGION 42 158 48 158 51
STRAND 53 158 59
COLOUR_TEXT_REGION 53 158 59 158 51
STRAND 102 158 108
COLOUR_TEXT_REGION 102 158 108 158 51
STRAND 125 158 126
COLOUR_TEXT_REGION 125 158 126 158 51
STRAND 154 158 164
COLOUR_TEXT_REGION 154 158 164 158 51
STRAND 171 158 173
COLOUR_TEXT_REGION 171 158 173 158 51
STRAND 192 158 196
COLOUR_TEXT_REGION 192 158 196 158 51
STRAND 230 158 238
COLOUR_TEXT_REGION 230 158 238 158 51
STRAND 253 158 258
COLOUR_TEXT_REGION 253 158 258 158 51
HELIX 16 158 19
COLOUR_TEXT_REGION 16 158 19 158 50
HELIX 73 158 95
COLOUR_TEXT_REGION 73 158 95 158 50
HELIX 176 158 186
COLOUR_TEXT_REGION 176 158 186 158 50
HELIX 200 158 205
COLOUR_TEXT_REGION 200 158 205 158 50