SILENT_MODE BLOCK_FILE jp_9HM3PBj.concise.blc MAX_NSEQ 738 MAX_INPUT_LEN 740 OUTPUT_FILE jp_9HM3PBj.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 205 727 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 728 205 737 H SPACE SUB_CHARS 1 728 205 737 E SPACE SUB_CHARS 1 728 205 737 - SPACE STRAND 35 731 38 COLOUR_TEXT_REGION 35 731 38 731 51 STRAND 41 731 45 COLOUR_TEXT_REGION 41 731 45 731 51 STRAND 60 731 69 COLOUR_TEXT_REGION 60 731 69 731 51 STRAND 75 731 80 COLOUR_TEXT_REGION 75 731 80 731 51 STRAND 133 731 135 COLOUR_TEXT_REGION 133 731 135 731 51 STRAND 140 731 143 COLOUR_TEXT_REGION 140 731 143 731 51 STRAND 165 731 176 COLOUR_TEXT_REGION 165 731 176 731 51 STRAND 182 731 188 COLOUR_TEXT_REGION 182 731 188 731 51 HELIX 6 731 31 COLOUR_TEXT_REGION 6 731 31 731 50 HELIX 47 731 54 COLOUR_TEXT_REGION 47 731 54 731 50 HELIX 83 731 93 COLOUR_TEXT_REGION 83 731 93 731 50 HELIX 104 731 130 COLOUR_TEXT_REGION 104 731 130 731 50 HELIX 192 731 201 COLOUR_TEXT_REGION 192 731 201 731 50 STRAND 34 736 37 COLOUR_TEXT_REGION 34 736 37 736 51 STRAND 41 736 45 COLOUR_TEXT_REGION 41 736 45 736 51 STRAND 60 736 69 COLOUR_TEXT_REGION 60 736 69 736 51 STRAND 75 736 80 COLOUR_TEXT_REGION 75 736 80 736 51 STRAND 133 736 134 COLOUR_TEXT_REGION 133 736 134 736 51 STRAND 140 736 143 COLOUR_TEXT_REGION 140 736 143 736 51 STRAND 165 736 176 COLOUR_TEXT_REGION 165 736 176 736 51 STRAND 182 736 189 COLOUR_TEXT_REGION 182 736 189 736 51 HELIX 6 736 31 COLOUR_TEXT_REGION 6 736 31 736 50 HELIX 47 736 54 COLOUR_TEXT_REGION 47 736 54 736 50 HELIX 83 736 92 COLOUR_TEXT_REGION 83 736 92 736 50 HELIX 105 736 130 COLOUR_TEXT_REGION 105 736 130 736 50 HELIX 192 736 201 COLOUR_TEXT_REGION 192 736 201 736 50 STRAND 35 737 39 COLOUR_TEXT_REGION 35 737 39 737 51 STRAND 42 737 45 COLOUR_TEXT_REGION 42 737 45 737 51 STRAND 60 737 69 COLOUR_TEXT_REGION 60 737 69 737 51 STRAND 74 737 79 COLOUR_TEXT_REGION 74 737 79 737 51 STRAND 133 737 135 COLOUR_TEXT_REGION 133 737 135 737 51 STRAND 140 737 144 COLOUR_TEXT_REGION 140 737 144 737 51 STRAND 165 737 176 COLOUR_TEXT_REGION 165 737 176 737 51 STRAND 182 737 188 COLOUR_TEXT_REGION 182 737 188 737 51 HELIX 6 737 31 COLOUR_TEXT_REGION 6 737 31 737 50 HELIX 47 737 54 COLOUR_TEXT_REGION 47 737 54 737 50 HELIX 82 737 93 COLOUR_TEXT_REGION 82 737 93 737 50 HELIX 104 737 129 COLOUR_TEXT_REGION 104 737 129 737 50 HELIX 192 737 202 COLOUR_TEXT_REGION 192 737 202 737 50