SILENT_MODE
BLOCK_FILE jp_pCkdbb0.concise.blc
MAX_NSEQ 57
MAX_INPUT_LEN 59
OUTPUT_FILE jp_pCkdbb0.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 44 46   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 47 44 56 H SPACE
SUB_CHARS 1 47 44 56 E SPACE
SUB_CHARS 1 47 44 56 - SPACE
HELIX 4 50 7
COLOUR_TEXT_REGION 4 50 7 50 50
HELIX 11 50 20
COLOUR_TEXT_REGION 11 50 20 50 50
HELIX 31 50 40
COLOUR_TEXT_REGION 31 50 40 50 50
HELIX 5 55 5
COLOUR_TEXT_REGION 5 55 5 55 50
HELIX 7 55 7
COLOUR_TEXT_REGION 7 55 7 55 50
HELIX 11 55 20
COLOUR_TEXT_REGION 11 55 20 55 50
HELIX 31 55 40
COLOUR_TEXT_REGION 31 55 40 55 50
HELIX 3 56 7
COLOUR_TEXT_REGION 3 56 7 56 50
HELIX 9 56 9
COLOUR_TEXT_REGION 9 56 9 56 50
HELIX 11 56 20
COLOUR_TEXT_REGION 11 56 20 56 50
HELIX 31 56 40
COLOUR_TEXT_REGION 31 56 40 56 50