QUERY : FQREELMKMKVKDLRDYLSLHDISTEMCREKEELVLLVLGQQPV : QUERY
UniRef90_M4AL56 : FHRPRLMRLRVRDLRQYLLLRNISTDTCREKEDLVDLVLCHQ-- : UniRef90_M4AL56
UniRef90_H0V3G4 : FQRPQLMRLKVKDLRRYLALRGVPTDTCREKEDLVDLVLCHHG- : UniRef90_H0V3G4
UniRef90_F1RAJ9 : FQRSQLMRLRVKDLRQYLMLRNINTDTCREKEDLVDLVLCHHG- : UniRef90_F1RAJ9
UniRef90_V9KUH1 : FQRDELMKLKVKDLRDYLQLHEISMEMCREKADLVELVLGQQP- : UniRef90_V9KUH1
UniRef90_H3BGN2 : FQRPLLMQLKVKDLRQYLTLRNIPTDTCREKEDLVDLVLYH--- : UniRef90_H3BGN2
UniRef90_W5KSE2 : FERAELMKLKVKDLRDYLHLHEVPTQMCREKEELVDLVLGQH-- : UniRef90_W5KSE2
UniRef90_F6ZEQ8 : FDRDELMKLRVKDLRDYLTLKDIPIDLCREKEDLVQLILFHKP- : UniRef90_F6ZEQ8
UniRef90_H3DB28 : FQRPR-MRLRVRDLRQYLLLHSIPIDTCREKEDLVDLVLRHQ-- : UniRef90_H3DB28
UniRef90_V8NZP5 : FQREELIKMKVKDLRDYLELREISTEMCREKDELVCLIISQQP- : UniRef90_V8NZP5
UniRef90_A7MBX4 : FERADLMRLKVKDLRDYLHLHQTPTQMCREKEELVELVLDQQ-- : UniRef90_A7MBX4
UniRef90_Q4SB03 : --RSELMKLKVRELRDYLHLHGISTHLCREKEELVELVLCQQ-- : UniRef90_Q4SB03
UniRef90_S4RIQ7 : FSKDNLMRAKVKDLRDYLSLHGIAMETCREKEELVELVLQHR-- : UniRef90_S4RIQ7
UniRef90_UPI00035A278D : FTRDDLQGWKIKDMRCFLNVRNISTKDCREKHDLIELILAH--- : UniRef90_UPI00035A278D
UniRef90_K1Q4G1 : FTRQDLQKWKVKDLRCVLHKRNISTETCREKHDLIDLLVITFGV : UniRef90_K1Q4G1
UniRef90_T1GAZ3 : LHKVDLLKLKPKDLIFYLQSKHISTAGCVEKEELVNLVLIH--- : UniRef90_T1GAZ3
UniRef90_C3Z427 : -ERSELRRLRVKDLRQFLTTKHIPSDMCTEKDELVELIMRH--- : UniRef90_C3Z427
UniRef90_B4LM35 : -QRPDLLKLKPKDLIFYLQSKHISTEGCLEKEELVGLVLAH--- : UniRef90_B4LM35
UniRef90_UPI0002652404 : -TRAELMALKIKDLRLYLNTHSVSTQSCTEKDDLVDLVV----- : UniRef90_UPI0002652404
UniRef90_UPI0002652404 : -TRAELMALKIKDLRLYLNTHSVSTQSCTEKDDLVDLVV----- : UniRef90_UPI0002652404
UniRef90_UPI0003C36F34 : LQRSDLVQLKTKDLIFYLQSKHISTAGCVEKEDLIDLVMR---- : UniRef90_UPI0003C36F34
UniRef90_T1KBK2 : LERTALLELRIKDLKWYMDKKRIPHRFCKEKSELVDLILRN--- : UniRef90_T1KBK2
UniRef90_W5KFF1 : ------MRLKVKELRDYLHLHEIPTQTCREKEELVELVLGQ--- : UniRef90_W5KFF1
UniRef90_T1IJZ4 : LDRSELMHLRVRELQHFLLNRNIPVHTCTEKRDLVDLVLR---- : UniRef90_T1IJZ4
UniRef90_G5E367 : FQRPQLMKLKVKDLRQYLSLRNIPLSDLSMPEEIEGLTIRQ--- : UniRef90_G5E367
UniRef90_A7RV74 : -HKDFLQYLKIKDLQDFLRLKNIPMSQCKEKRDLIELIL----- : UniRef90_A7RV74
UniRef90_Q17B26 : LSKVDLGQLKNKDLILYLQSKHISTAGCVEKDDLINLVIGH--- : UniRef90_Q17B26
UniRef90_S4PEF8 : LARQYIAHLKVRDLQYFLQRQNVSTRGCVEKEELVNLCVSH--- : UniRef90_S4PEF8
UniRef90_E0VTT6 : LDRNELLNLRSRDLINYLTSRHISTSGCVEKEDLVNILIR---- : UniRef90_E0VTT6
UniRef90_N6UD86 : -DRVKLMELKSKDLRDYLNKNNVSTYGVVEKKEMVDLL------ : UniRef90_N6UD86
UniRef90_U9V0W9 : --RSQLARLPTKTLREYISAYNLPCHNIIEKDDLIDVIMAHIPL : UniRef90_U9V0W9
UniRef90_G0V2K1 : FTREELQGMTVRTLKTLLWLNNVSWDGCLEKEDMIKVFLEHQG- : UniRef90_G0V2K1
UniRef90_UPI0002B8DEA1 : ------MQIKVKDLQGYLKNFKIEHRTCKEKHELVKLIQNQFGI : UniRef90_UPI0002B8DEA1
UniRef90_UPI00018866F3 : --RSQILQMRSKYLRQYLLAKNVSLRGCIEKEDLVNLLI----- : UniRef90_UPI00018866F3
UniRef90_B7PKW4 : -DRQALLGLRVRDLCALLRARNVSLHGVTEKTELVDLLLGQEP- : UniRef90_B7PKW4
UniRef90_T2M8E1 : FQRGNLFLLETKQLSEFLNERHISTTHCREKYDLIDLIM----- : UniRef90_T2M8E1
UniRef90_D6X2I4 : -----LMKLKSKDLQEYLNRHNVTTFGLVEKRELVE-VLCNRAI : UniRef90_D6X2I4
UniRef90_G0U8L9 : -TREALMRMTVRELKTLMWLNGVSWDGCIEKEELVQVVETHR-- : UniRef90_G0U8L9
UniRef90_R7UCE6 : FTRKDLAEFKVKELRAFLDRRSVSTQNCMEKADFVEAV------ : UniRef90_R7UCE6
UniRef90_L8GTF6 : --RDELMRMPIRDLKQVLSEHGISAAGLPEKGDLVAVIL----- : UniRef90_L8GTF6
UniRef90_X1YBZ6 : LSRTDLAQLKVRELIFYLQSKHISTSGC---------------- : UniRef90_X1YBZ6
UniRef90_B3S698 : -DQSRVMLLKAKDLRKFLVTNNIPTRTSQSKLEMVELVISH--- : UniRef90_B3S698
UniRef90_E2C8N1 : --RNQIRQMRSRDLRQYLVAKKVSIKGCVEKEDLVHVLM----- : UniRef90_E2C8N1
: 1---------11--------21--------31--------41-- :
OrigSeq : FQREELMKMKVKDLRDYLSLHDISTEMCREKEELVLLVLGQQPV : OrigSeq
Jnet : ---HHHH---HHHHHHHHHH----------HHHHHHHHHH---- : Jnet
jhmm : ----H-H---HHHHHHHHHH----------HHHHHHHHHH---- : jhmm
jpssm : --HHHHH-H-HHHHHHHHHH----------HHHHHHHHHH---- : jpssm
Lupas 14 : -------------------------------------------- : Lupas 14
Lupas 21 : -------------------------------------------- : Lupas 21
Lupas 28 : -------------------------------------------- : Lupas 28
Jnet_25 : -----BB-B-B--B--BB----B----B-----BB-BBB----- : Jnet_25
Jnet_5 : -----B-------B--BB---------B-----BB-BB------ : Jnet_5
Jnet_0 : -------------B------------------------------ : Jnet_0
Jnet Rel : 97147350325899999885167887764337889998745999 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.