SILENT_MODE
BLOCK_FILE jp_qFzpzGr.concise.blc
MAX_NSEQ 226
MAX_INPUT_LEN 228
OUTPUT_FILE jp_qFzpzGr.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 71 215   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 216 71 225 H SPACE
SUB_CHARS 1 216 71 225 E SPACE
SUB_CHARS 1 216 71 225 - SPACE
STRAND 45 219 50
COLOUR_TEXT_REGION 45 219 50 219 51
STRAND 56 219 59
COLOUR_TEXT_REGION 56 219 59 219 51
HELIX 12 219 23
COLOUR_TEXT_REGION 12 219 23 219 50
HELIX 29 219 41
COLOUR_TEXT_REGION 29 219 41 219 50
HELIX 62 219 69
COLOUR_TEXT_REGION 62 219 69 219 50
STRAND 3 224 4
COLOUR_TEXT_REGION 3 224 4 224 51
STRAND 44 224 50
COLOUR_TEXT_REGION 44 224 50 224 51
STRAND 56 224 59
COLOUR_TEXT_REGION 56 224 59 224 51
HELIX 12 224 23
COLOUR_TEXT_REGION 12 224 23 224 50
HELIX 29 224 41
COLOUR_TEXT_REGION 29 224 41 224 50
HELIX 61 224 69
COLOUR_TEXT_REGION 61 224 69 224 50
STRAND 45 225 50
COLOUR_TEXT_REGION 45 225 50 225 51
STRAND 55 225 60
COLOUR_TEXT_REGION 55 225 60 225 51
HELIX 12 225 24
COLOUR_TEXT_REGION 12 225 24 225 50
HELIX 29 225 41
COLOUR_TEXT_REGION 29 225 41 225 50
HELIX 66 225 69
COLOUR_TEXT_REGION 66 225 69 225 50