SILENT_MODE
BLOCK_FILE jp_8WdYe0p.concise.blc
MAX_NSEQ 823
MAX_INPUT_LEN 825
OUTPUT_FILE jp_8WdYe0p.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 160 812   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 813 160 822 H SPACE
SUB_CHARS 1 813 160 822 E SPACE
SUB_CHARS 1 813 160 822 - SPACE
STRAND 5 816 8
COLOUR_TEXT_REGION 5 816 8 816 51
STRAND 15 816 17
COLOUR_TEXT_REGION 15 816 17 816 51
STRAND 23 816 30
COLOUR_TEXT_REGION 23 816 30 816 51
STRAND 49 816 51
COLOUR_TEXT_REGION 49 816 51 816 51
STRAND 54 816 59
COLOUR_TEXT_REGION 54 816 59 816 51
STRAND 79 816 86
COLOUR_TEXT_REGION 79 816 86 816 51
STRAND 93 816 101
COLOUR_TEXT_REGION 93 816 101 816 51
STRAND 103 816 110
COLOUR_TEXT_REGION 103 816 110 816 51
STRAND 119 816 137
COLOUR_TEXT_REGION 119 816 137 816 51
STRAND 148 816 155
COLOUR_TEXT_REGION 148 816 155 816 51
HELIX 63 816 72
COLOUR_TEXT_REGION 63 816 72 816 50
STRAND 5 821 8
COLOUR_TEXT_REGION 5 821 8 821 51
STRAND 15 821 17
COLOUR_TEXT_REGION 15 821 17 821 51
STRAND 23 821 30
COLOUR_TEXT_REGION 23 821 30 821 51
STRAND 49 821 51
COLOUR_TEXT_REGION 49 821 51 821 51
STRAND 54 821 59
COLOUR_TEXT_REGION 54 821 59 821 51
STRAND 79 821 86
COLOUR_TEXT_REGION 79 821 86 821 51
STRAND 93 821 100
COLOUR_TEXT_REGION 93 821 100 821 51
STRAND 103 821 110
COLOUR_TEXT_REGION 103 821 110 821 51
STRAND 119 821 136
COLOUR_TEXT_REGION 119 821 136 821 51
STRAND 148 821 154
COLOUR_TEXT_REGION 148 821 154 821 51
HELIX 60 821 72
COLOUR_TEXT_REGION 60 821 72 821 50
HELIX 155 821 155
COLOUR_TEXT_REGION 155 821 155 821 50
STRAND 4 822 8
COLOUR_TEXT_REGION 4 822 8 822 51
STRAND 16 822 16
COLOUR_TEXT_REGION 16 822 16 822 51
STRAND 23 822 29
COLOUR_TEXT_REGION 23 822 29 822 51
STRAND 48 822 51
COLOUR_TEXT_REGION 48 822 51 822 51
STRAND 54 822 59
COLOUR_TEXT_REGION 54 822 59 822 51
STRAND 80 822 86
COLOUR_TEXT_REGION 80 822 86 822 51
STRAND 95 822 101
COLOUR_TEXT_REGION 95 822 101 822 51
STRAND 104 822 109
COLOUR_TEXT_REGION 104 822 109 822 51
STRAND 120 822 137
COLOUR_TEXT_REGION 120 822 137 822 51
STRAND 148 822 155
COLOUR_TEXT_REGION 148 822 155 822 51
HELIX 64 822 72
COLOUR_TEXT_REGION 64 822 72 822 50