SILENT_MODE BLOCK_FILE jp_50RR3kh.concise.blc MAX_NSEQ 418 MAX_INPUT_LEN 420 OUTPUT_FILE jp_50RR3kh.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 217 407 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 408 217 417 H SPACE SUB_CHARS 1 408 217 417 E SPACE SUB_CHARS 1 408 217 417 - SPACE STRAND 36 411 37 COLOUR_TEXT_REGION 36 411 37 411 51 STRAND 110 411 113 COLOUR_TEXT_REGION 110 411 113 411 51 STRAND 158 411 161 COLOUR_TEXT_REGION 158 411 161 411 51 STRAND 197 411 203 COLOUR_TEXT_REGION 197 411 203 411 51 STRAND 210 411 215 COLOUR_TEXT_REGION 210 411 215 411 51 HELIX 3 411 26 COLOUR_TEXT_REGION 3 411 26 411 50 HELIX 40 411 43 COLOUR_TEXT_REGION 40 411 43 411 50 HELIX 52 411 70 COLOUR_TEXT_REGION 52 411 70 411 50 HELIX 75 411 103 COLOUR_TEXT_REGION 75 411 103 411 50 HELIX 118 411 139 COLOUR_TEXT_REGION 118 411 139 411 50 HELIX 147 411 157 COLOUR_TEXT_REGION 147 411 157 411 50 HELIX 166 411 169 COLOUR_TEXT_REGION 166 411 169 411 50 HELIX 174 411 189 COLOUR_TEXT_REGION 174 411 189 411 50 HELIX 195 411 196 COLOUR_TEXT_REGION 195 411 196 411 50 STRAND 36 416 37 COLOUR_TEXT_REGION 36 416 37 416 51 STRAND 110 416 112 COLOUR_TEXT_REGION 110 416 112 416 51 STRAND 158 416 161 COLOUR_TEXT_REGION 158 416 161 416 51 STRAND 196 416 203 COLOUR_TEXT_REGION 196 416 203 416 51 STRAND 210 416 215 COLOUR_TEXT_REGION 210 416 215 416 51 HELIX 2 416 22 COLOUR_TEXT_REGION 2 416 22 416 50 HELIX 39 416 44 COLOUR_TEXT_REGION 39 416 44 416 50 HELIX 52 416 71 COLOUR_TEXT_REGION 52 416 71 416 50 HELIX 75 416 105 COLOUR_TEXT_REGION 75 416 105 416 50 HELIX 117 416 139 COLOUR_TEXT_REGION 117 416 139 416 50 HELIX 147 416 157 COLOUR_TEXT_REGION 147 416 157 416 50 HELIX 166 416 169 COLOUR_TEXT_REGION 166 416 169 416 50 HELIX 174 416 189 COLOUR_TEXT_REGION 174 416 189 416 50 STRAND 35 417 36 COLOUR_TEXT_REGION 35 417 36 417 51 STRAND 42 417 43 COLOUR_TEXT_REGION 42 417 43 417 51 STRAND 48 417 50 COLOUR_TEXT_REGION 48 417 50 417 51 STRAND 109 417 114 COLOUR_TEXT_REGION 109 417 114 417 51 STRAND 147 417 151 COLOUR_TEXT_REGION 147 417 151 417 51 STRAND 158 417 161 COLOUR_TEXT_REGION 158 417 161 417 51 STRAND 201 417 202 COLOUR_TEXT_REGION 201 417 202 417 51 STRAND 211 417 215 COLOUR_TEXT_REGION 211 417 215 417 51 HELIX 3 417 28 COLOUR_TEXT_REGION 3 417 28 417 50 HELIX 51 417 68 COLOUR_TEXT_REGION 51 417 68 417 50 HELIX 77 417 81 COLOUR_TEXT_REGION 77 417 81 417 50 HELIX 85 417 95 COLOUR_TEXT_REGION 85 417 95 417 50 HELIX 99 417 100 COLOUR_TEXT_REGION 99 417 100 417 50 HELIX 119 417 138 COLOUR_TEXT_REGION 119 417 138 417 50 HELIX 152 417 157 COLOUR_TEXT_REGION 152 417 157 417 50 HELIX 166 417 169 COLOUR_TEXT_REGION 166 417 169 417 50 HELIX 175 417 189 COLOUR_TEXT_REGION 175 417 189 417 50 HELIX 192 417 200 COLOUR_TEXT_REGION 192 417 200 417 50