SILENT_MODE
BLOCK_FILE jp_hx7tXUb.concise.blc
MAX_NSEQ 886
MAX_INPUT_LEN 888
OUTPUT_FILE jp_hx7tXUb.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 101 875   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 876 101 885 H SPACE
SUB_CHARS 1 876 101 885 E SPACE
SUB_CHARS 1 876 101 885 - SPACE
STRAND 45 879 45
COLOUR_TEXT_REGION 45 879 45 879 51
HELIX 6 879 10
COLOUR_TEXT_REGION 6 879 10 879 50
HELIX 18 879 37
COLOUR_TEXT_REGION 18 879 37 879 50
HELIX 48 879 58
COLOUR_TEXT_REGION 48 879 58 879 50
HELIX 62 879 67
COLOUR_TEXT_REGION 62 879 67 879 50
HELIX 72 879 90
COLOUR_TEXT_REGION 72 879 90 879 50
STRAND 44 884 45
COLOUR_TEXT_REGION 44 884 45 884 51
HELIX 6 884 9
COLOUR_TEXT_REGION 6 884 9 884 50
HELIX 18 884 37
COLOUR_TEXT_REGION 18 884 37 884 50
HELIX 48 884 58
COLOUR_TEXT_REGION 48 884 58 884 50
HELIX 62 884 66
COLOUR_TEXT_REGION 62 884 66 884 50
HELIX 72 884 90
COLOUR_TEXT_REGION 72 884 90 884 50
STRAND 45 885 45
COLOUR_TEXT_REGION 45 885 45 885 51
HELIX 5 885 10
COLOUR_TEXT_REGION 5 885 10 885 50
HELIX 18 885 37
COLOUR_TEXT_REGION 18 885 37 885 50
HELIX 48 885 57
COLOUR_TEXT_REGION 48 885 57 885 50
HELIX 62 885 67
COLOUR_TEXT_REGION 62 885 67 885 50
HELIX 73 885 90
COLOUR_TEXT_REGION 73 885 90 885 50