SILENT_MODE BLOCK_FILE jp_yepumyx.concise.blc MAX_NSEQ 426 MAX_INPUT_LEN 428 OUTPUT_FILE jp_yepumyx.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 346 415 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 416 346 425 H SPACE SUB_CHARS 1 416 346 425 E SPACE SUB_CHARS 1 416 346 425 - SPACE STRAND 42 419 43 COLOUR_TEXT_REGION 42 419 43 419 51 HELIX 25 419 36 COLOUR_TEXT_REGION 25 419 36 419 50 HELIX 50 419 62 COLOUR_TEXT_REGION 50 419 62 419 50 HELIX 67 419 78 COLOUR_TEXT_REGION 67 419 78 419 50 HELIX 86 419 97 COLOUR_TEXT_REGION 86 419 97 419 50 HELIX 102 419 115 COLOUR_TEXT_REGION 102 419 115 419 50 HELIX 119 419 130 COLOUR_TEXT_REGION 119 419 130 419 50 HELIX 136 419 144 COLOUR_TEXT_REGION 136 419 144 419 50 HELIX 149 419 158 COLOUR_TEXT_REGION 149 419 158 419 50 HELIX 167 419 173 COLOUR_TEXT_REGION 167 419 173 419 50 HELIX 180 419 191 COLOUR_TEXT_REGION 180 419 191 419 50 HELIX 209 419 224 COLOUR_TEXT_REGION 209 419 224 419 50 HELIX 229 419 238 COLOUR_TEXT_REGION 229 419 238 419 50 HELIX 243 419 247 COLOUR_TEXT_REGION 243 419 247 419 50 HELIX 254 419 261 COLOUR_TEXT_REGION 254 419 261 419 50 HELIX 266 419 278 COLOUR_TEXT_REGION 266 419 278 419 50 HELIX 287 419 296 COLOUR_TEXT_REGION 287 419 296 419 50 HELIX 299 419 304 COLOUR_TEXT_REGION 299 419 304 419 50 HELIX 309 419 320 COLOUR_TEXT_REGION 309 419 320 419 50 HELIX 330 419 344 COLOUR_TEXT_REGION 330 419 344 419 50 STRAND 42 424 43 COLOUR_TEXT_REGION 42 424 43 424 51 HELIX 25 424 36 COLOUR_TEXT_REGION 25 424 36 424 50 HELIX 49 424 62 COLOUR_TEXT_REGION 49 424 62 424 50 HELIX 67 424 78 COLOUR_TEXT_REGION 67 424 78 424 50 HELIX 86 424 97 COLOUR_TEXT_REGION 86 424 97 424 50 HELIX 102 424 115 COLOUR_TEXT_REGION 102 424 115 424 50 HELIX 120 424 130 COLOUR_TEXT_REGION 120 424 130 424 50 HELIX 136 424 144 COLOUR_TEXT_REGION 136 424 144 424 50 HELIX 149 424 158 COLOUR_TEXT_REGION 149 424 158 424 50 HELIX 167 424 173 COLOUR_TEXT_REGION 167 424 173 424 50 HELIX 181 424 191 COLOUR_TEXT_REGION 181 424 191 424 50 HELIX 209 424 223 COLOUR_TEXT_REGION 209 424 223 424 50 HELIX 229 424 238 COLOUR_TEXT_REGION 229 424 238 424 50 HELIX 243 424 247 COLOUR_TEXT_REGION 243 424 247 424 50 HELIX 254 424 261 COLOUR_TEXT_REGION 254 424 261 424 50 HELIX 266 424 278 COLOUR_TEXT_REGION 266 424 278 424 50 HELIX 287 424 296 COLOUR_TEXT_REGION 287 424 296 424 50 HELIX 299 424 304 COLOUR_TEXT_REGION 299 424 304 424 50 HELIX 309 424 320 COLOUR_TEXT_REGION 309 424 320 424 50 HELIX 330 424 344 COLOUR_TEXT_REGION 330 424 344 424 50 STRAND 42 425 44 COLOUR_TEXT_REGION 42 425 44 425 51 STRAND 172 425 173 COLOUR_TEXT_REGION 172 425 173 425 51 HELIX 25 425 36 COLOUR_TEXT_REGION 25 425 36 425 50 HELIX 51 425 62 COLOUR_TEXT_REGION 51 425 62 425 50 HELIX 67 425 78 COLOUR_TEXT_REGION 67 425 78 425 50 HELIX 87 425 97 COLOUR_TEXT_REGION 87 425 97 425 50 HELIX 102 425 116 COLOUR_TEXT_REGION 102 425 116 425 50 HELIX 118 425 130 COLOUR_TEXT_REGION 118 425 130 425 50 HELIX 135 425 144 COLOUR_TEXT_REGION 135 425 144 425 50 HELIX 149 425 159 COLOUR_TEXT_REGION 149 425 159 425 50 HELIX 167 425 171 COLOUR_TEXT_REGION 167 425 171 425 50 HELIX 180 425 191 COLOUR_TEXT_REGION 180 425 191 425 50 HELIX 210 425 224 COLOUR_TEXT_REGION 210 425 224 425 50 HELIX 229 425 237 COLOUR_TEXT_REGION 229 425 237 425 50 HELIX 244 425 249 COLOUR_TEXT_REGION 244 425 249 425 50 HELIX 254 425 262 COLOUR_TEXT_REGION 254 425 262 425 50 HELIX 266 425 278 COLOUR_TEXT_REGION 266 425 278 425 50 HELIX 287 425 296 COLOUR_TEXT_REGION 287 425 296 425 50 HELIX 299 425 305 COLOUR_TEXT_REGION 299 425 305 425 50 HELIX 309 425 320 COLOUR_TEXT_REGION 309 425 320 425 50 HELIX 330 425 344 COLOUR_TEXT_REGION 330 425 344 425 50