SILENT_MODE BLOCK_FILE jp_CB4LBDI.concise.blc MAX_NSEQ 505 MAX_INPUT_LEN 507 OUTPUT_FILE jp_CB4LBDI.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 122 494 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 495 122 504 H SPACE SUB_CHARS 1 495 122 504 E SPACE SUB_CHARS 1 495 122 504 - SPACE STRAND 14 498 19 COLOUR_TEXT_REGION 14 498 19 498 51 STRAND 23 498 26 COLOUR_TEXT_REGION 23 498 26 498 51 STRAND 33 498 37 COLOUR_TEXT_REGION 33 498 37 498 51 STRAND 41 498 44 COLOUR_TEXT_REGION 41 498 44 498 51 STRAND 67 498 71 COLOUR_TEXT_REGION 67 498 71 498 51 STRAND 76 498 80 COLOUR_TEXT_REGION 76 498 80 498 51 STRAND 84 498 88 COLOUR_TEXT_REGION 84 498 88 498 51 STRAND 107 498 117 COLOUR_TEXT_REGION 107 498 117 498 51 HELIX 2 498 11 COLOUR_TEXT_REGION 2 498 11 498 50 HELIX 29 498 29 COLOUR_TEXT_REGION 29 498 29 498 50 HELIX 31 498 32 COLOUR_TEXT_REGION 31 498 32 498 50 HELIX 46 498 60 COLOUR_TEXT_REGION 46 498 60 498 50 HELIX 90 498 103 COLOUR_TEXT_REGION 90 498 103 498 50 STRAND 14 503 19 COLOUR_TEXT_REGION 14 503 19 503 51 STRAND 23 503 26 COLOUR_TEXT_REGION 23 503 26 503 51 STRAND 35 503 37 COLOUR_TEXT_REGION 35 503 37 503 51 STRAND 42 503 44 COLOUR_TEXT_REGION 42 503 44 503 51 STRAND 67 503 70 COLOUR_TEXT_REGION 67 503 70 503 51 STRAND 76 503 79 COLOUR_TEXT_REGION 76 503 79 503 51 STRAND 84 503 88 COLOUR_TEXT_REGION 84 503 88 503 51 STRAND 107 503 117 COLOUR_TEXT_REGION 107 503 117 503 51 HELIX 2 503 11 COLOUR_TEXT_REGION 2 503 11 503 50 HELIX 29 503 29 COLOUR_TEXT_REGION 29 503 29 503 50 HELIX 31 503 33 COLOUR_TEXT_REGION 31 503 33 503 50 HELIX 46 503 59 COLOUR_TEXT_REGION 46 503 59 503 50 HELIX 90 503 103 COLOUR_TEXT_REGION 90 503 103 503 50 STRAND 14 504 19 COLOUR_TEXT_REGION 14 504 19 504 51 STRAND 23 504 26 COLOUR_TEXT_REGION 23 504 26 504 51 STRAND 31 504 37 COLOUR_TEXT_REGION 31 504 37 504 51 STRAND 41 504 44 COLOUR_TEXT_REGION 41 504 44 504 51 STRAND 67 504 71 COLOUR_TEXT_REGION 67 504 71 504 51 STRAND 75 504 80 COLOUR_TEXT_REGION 75 504 80 504 51 STRAND 85 504 89 COLOUR_TEXT_REGION 85 504 89 504 51 STRAND 108 504 116 COLOUR_TEXT_REGION 108 504 116 504 51 HELIX 2 504 11 COLOUR_TEXT_REGION 2 504 11 504 50 HELIX 46 504 60 COLOUR_TEXT_REGION 46 504 60 504 50 HELIX 90 504 103 COLOUR_TEXT_REGION 90 504 103 504 50