SILENT_MODE BLOCK_FILE jp_T7O4rb_.concise.blc MAX_NSEQ 755 MAX_INPUT_LEN 757 OUTPUT_FILE jp_T7O4rb_.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 177 744 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 745 177 754 H SPACE SUB_CHARS 1 745 177 754 E SPACE SUB_CHARS 1 745 177 754 - SPACE STRAND 23 748 28 COLOUR_TEXT_REGION 23 748 28 748 51 STRAND 52 748 57 COLOUR_TEXT_REGION 52 748 57 748 51 STRAND 82 748 87 COLOUR_TEXT_REGION 82 748 87 748 51 STRAND 111 748 118 COLOUR_TEXT_REGION 111 748 118 748 51 HELIX 4 748 19 COLOUR_TEXT_REGION 4 748 19 748 50 HELIX 34 748 47 COLOUR_TEXT_REGION 34 748 47 748 50 HELIX 59 748 67 COLOUR_TEXT_REGION 59 748 67 748 50 HELIX 93 748 105 COLOUR_TEXT_REGION 93 748 105 748 50 HELIX 125 748 132 COLOUR_TEXT_REGION 125 748 132 748 50 HELIX 137 748 175 COLOUR_TEXT_REGION 137 748 175 748 50 STRAND 23 753 29 COLOUR_TEXT_REGION 23 753 29 753 51 STRAND 52 753 57 COLOUR_TEXT_REGION 52 753 57 753 51 STRAND 82 753 87 COLOUR_TEXT_REGION 82 753 87 753 51 STRAND 111 753 118 COLOUR_TEXT_REGION 111 753 118 753 51 HELIX 4 753 20 COLOUR_TEXT_REGION 4 753 20 753 50 HELIX 34 753 47 COLOUR_TEXT_REGION 34 753 47 753 50 HELIX 59 753 67 COLOUR_TEXT_REGION 59 753 67 753 50 HELIX 94 753 105 COLOUR_TEXT_REGION 94 753 105 753 50 HELIX 125 753 131 COLOUR_TEXT_REGION 125 753 131 753 50 HELIX 137 753 175 COLOUR_TEXT_REGION 137 753 175 753 50 STRAND 23 754 28 COLOUR_TEXT_REGION 23 754 28 754 51 STRAND 52 754 58 COLOUR_TEXT_REGION 52 754 58 754 51 STRAND 83 754 88 COLOUR_TEXT_REGION 83 754 88 754 51 STRAND 115 754 118 COLOUR_TEXT_REGION 115 754 118 754 51 HELIX 4 754 19 COLOUR_TEXT_REGION 4 754 19 754 50 HELIX 34 754 47 COLOUR_TEXT_REGION 34 754 47 754 50 HELIX 59 754 67 COLOUR_TEXT_REGION 59 754 67 754 50 HELIX 75 754 79 COLOUR_TEXT_REGION 75 754 79 754 50 HELIX 81 754 82 COLOUR_TEXT_REGION 81 754 82 754 50 HELIX 93 754 107 COLOUR_TEXT_REGION 93 754 107 754 50 HELIX 114 754 114 COLOUR_TEXT_REGION 114 754 114 754 50 HELIX 126 754 132 COLOUR_TEXT_REGION 126 754 132 754 50 HELIX 137 754 175 COLOUR_TEXT_REGION 137 754 175 754 50