SILENT_MODE BLOCK_FILE jp_WEOjWmX.concise.blc MAX_NSEQ 992 MAX_INPUT_LEN 994 OUTPUT_FILE jp_WEOjWmX.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 146 981 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 982 146 991 H SPACE SUB_CHARS 1 982 146 991 E SPACE SUB_CHARS 1 982 146 991 - SPACE STRAND 3 985 7 COLOUR_TEXT_REGION 3 985 7 985 51 STRAND 24 985 27 COLOUR_TEXT_REGION 24 985 27 985 51 STRAND 48 985 54 COLOUR_TEXT_REGION 48 985 54 985 51 STRAND 59 985 68 COLOUR_TEXT_REGION 59 985 68 985 51 STRAND 82 985 90 COLOUR_TEXT_REGION 82 985 90 985 51 STRAND 121 985 121 COLOUR_TEXT_REGION 121 985 121 985 51 HELIX 15 985 20 COLOUR_TEXT_REGION 15 985 20 985 50 HELIX 34 985 42 COLOUR_TEXT_REGION 34 985 42 985 50 HELIX 99 985 104 COLOUR_TEXT_REGION 99 985 104 985 50 HELIX 126 985 135 COLOUR_TEXT_REGION 126 985 135 985 50 STRAND 3 990 8 COLOUR_TEXT_REGION 3 990 8 990 51 STRAND 24 990 28 COLOUR_TEXT_REGION 24 990 28 990 51 STRAND 48 990 54 COLOUR_TEXT_REGION 48 990 54 990 51 STRAND 59 990 68 COLOUR_TEXT_REGION 59 990 68 990 51 STRAND 82 990 90 COLOUR_TEXT_REGION 82 990 90 990 51 HELIX 15 990 20 COLOUR_TEXT_REGION 15 990 20 990 50 HELIX 34 990 43 COLOUR_TEXT_REGION 34 990 43 990 50 HELIX 99 990 103 COLOUR_TEXT_REGION 99 990 103 990 50 HELIX 126 990 135 COLOUR_TEXT_REGION 126 990 135 990 50 STRAND 3 991 6 COLOUR_TEXT_REGION 3 991 6 991 51 STRAND 25 991 26 COLOUR_TEXT_REGION 25 991 26 991 51 STRAND 48 991 53 COLOUR_TEXT_REGION 48 991 53 991 51 STRAND 59 991 69 COLOUR_TEXT_REGION 59 991 69 991 51 STRAND 82 991 91 COLOUR_TEXT_REGION 82 991 91 991 51 STRAND 120 991 123 COLOUR_TEXT_REGION 120 991 123 991 51 HELIX 15 991 20 COLOUR_TEXT_REGION 15 991 20 991 50 HELIX 34 991 41 COLOUR_TEXT_REGION 34 991 41 991 50 HELIX 98 991 108 COLOUR_TEXT_REGION 98 991 108 991 50 HELIX 126 991 135 COLOUR_TEXT_REGION 126 991 135 991 50