SILENT_MODE BLOCK_FILE jp_7xF5g8h.concise.blc MAX_NSEQ 234 MAX_INPUT_LEN 236 OUTPUT_FILE jp_7xF5g8h.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 136 223 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 224 136 233 H SPACE SUB_CHARS 1 224 136 233 E SPACE SUB_CHARS 1 224 136 233 - SPACE STRAND 3 227 14 COLOUR_TEXT_REGION 3 227 14 227 51 STRAND 32 227 36 COLOUR_TEXT_REGION 32 227 36 227 51 STRAND 93 227 99 COLOUR_TEXT_REGION 93 227 99 227 51 HELIX 19 227 28 COLOUR_TEXT_REGION 19 227 28 227 50 HELIX 40 227 57 COLOUR_TEXT_REGION 40 227 57 227 50 HELIX 67 227 73 COLOUR_TEXT_REGION 67 227 73 227 50 HELIX 77 227 86 COLOUR_TEXT_REGION 77 227 86 227 50 HELIX 103 227 111 COLOUR_TEXT_REGION 103 227 111 227 50 HELIX 125 227 134 COLOUR_TEXT_REGION 125 227 134 227 50 STRAND 3 232 13 COLOUR_TEXT_REGION 3 232 13 232 51 STRAND 32 232 36 COLOUR_TEXT_REGION 32 232 36 232 51 STRAND 68 232 72 COLOUR_TEXT_REGION 68 232 72 232 51 STRAND 94 232 99 COLOUR_TEXT_REGION 94 232 99 232 51 HELIX 19 232 28 COLOUR_TEXT_REGION 19 232 28 232 50 HELIX 41 232 56 COLOUR_TEXT_REGION 41 232 56 232 50 HELIX 79 232 86 COLOUR_TEXT_REGION 79 232 86 232 50 HELIX 104 232 111 COLOUR_TEXT_REGION 104 232 111 232 50 HELIX 125 232 134 COLOUR_TEXT_REGION 125 232 134 232 50 STRAND 2 233 7 COLOUR_TEXT_REGION 2 233 7 233 51 STRAND 10 233 16 COLOUR_TEXT_REGION 10 233 16 233 51 STRAND 32 233 36 COLOUR_TEXT_REGION 32 233 36 233 51 STRAND 93 233 99 COLOUR_TEXT_REGION 93 233 99 233 51 HELIX 20 233 28 COLOUR_TEXT_REGION 20 233 28 233 50 HELIX 40 233 57 COLOUR_TEXT_REGION 40 233 57 233 50 HELIX 66 233 85 COLOUR_TEXT_REGION 66 233 85 233 50 HELIX 103 233 111 COLOUR_TEXT_REGION 103 233 111 233 50 HELIX 125 233 134 COLOUR_TEXT_REGION 125 233 134 233 50