SILENT_MODE BLOCK_FILE jp_I8GzPuI.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_I8GzPuI.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 209 12 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 13 209 22 H SPACE SUB_CHARS 1 13 209 22 E SPACE SUB_CHARS 1 13 209 22 - SPACE STRAND 17 16 18 COLOUR_TEXT_REGION 17 16 18 16 51 STRAND 39 16 43 COLOUR_TEXT_REGION 39 16 43 16 51 STRAND 57 16 62 COLOUR_TEXT_REGION 57 16 62 16 51 STRAND 70 16 72 COLOUR_TEXT_REGION 70 16 72 16 51 STRAND 176 16 179 COLOUR_TEXT_REGION 176 16 179 16 51 STRAND 186 16 189 COLOUR_TEXT_REGION 186 16 189 16 51 HELIX 6 16 9 COLOUR_TEXT_REGION 6 16 9 16 50 HELIX 19 16 30 COLOUR_TEXT_REGION 19 16 30 16 50 HELIX 51 16 53 COLOUR_TEXT_REGION 51 16 53 16 50 HELIX 98 16 106 COLOUR_TEXT_REGION 98 16 106 16 50 HELIX 116 16 127 COLOUR_TEXT_REGION 116 16 127 16 50 HELIX 131 16 138 COLOUR_TEXT_REGION 131 16 138 16 50 HELIX 144 16 154 COLOUR_TEXT_REGION 144 16 154 16 50 HELIX 192 16 207 COLOUR_TEXT_REGION 192 16 207 16 50 STRAND 17 21 17 COLOUR_TEXT_REGION 17 21 17 21 51 STRAND 39 21 43 COLOUR_TEXT_REGION 39 21 43 21 51 STRAND 57 21 62 COLOUR_TEXT_REGION 57 21 62 21 51 STRAND 70 21 72 COLOUR_TEXT_REGION 70 21 72 21 51 STRAND 176 21 179 COLOUR_TEXT_REGION 176 21 179 21 51 STRAND 186 21 190 COLOUR_TEXT_REGION 186 21 190 21 51 HELIX 6 21 9 COLOUR_TEXT_REGION 6 21 9 21 50 HELIX 18 21 29 COLOUR_TEXT_REGION 18 21 29 21 50 HELIX 48 21 48 COLOUR_TEXT_REGION 48 21 48 21 50 HELIX 51 21 52 COLOUR_TEXT_REGION 51 21 52 21 50 HELIX 98 21 106 COLOUR_TEXT_REGION 98 21 106 21 50 HELIX 115 21 127 COLOUR_TEXT_REGION 115 21 127 21 50 HELIX 131 21 138 COLOUR_TEXT_REGION 131 21 138 21 50 HELIX 143 21 154 COLOUR_TEXT_REGION 143 21 154 21 50 HELIX 192 21 207 COLOUR_TEXT_REGION 192 21 207 21 50 STRAND 16 22 19 COLOUR_TEXT_REGION 16 22 19 22 51 STRAND 39 22 43 COLOUR_TEXT_REGION 39 22 43 22 51 STRAND 57 22 62 COLOUR_TEXT_REGION 57 22 62 22 51 STRAND 70 22 72 COLOUR_TEXT_REGION 70 22 72 22 51 STRAND 176 22 179 COLOUR_TEXT_REGION 176 22 179 22 51 STRAND 187 22 188 COLOUR_TEXT_REGION 187 22 188 22 51 HELIX 5 22 10 COLOUR_TEXT_REGION 5 22 10 22 50 HELIX 20 22 32 COLOUR_TEXT_REGION 20 22 32 22 50 HELIX 52 22 54 COLOUR_TEXT_REGION 52 22 54 22 50 HELIX 69 22 69 COLOUR_TEXT_REGION 69 22 69 22 50 HELIX 98 22 106 COLOUR_TEXT_REGION 98 22 106 22 50 HELIX 118 22 128 COLOUR_TEXT_REGION 118 22 128 22 50 HELIX 132 22 138 COLOUR_TEXT_REGION 132 22 138 22 50 HELIX 144 22 155 COLOUR_TEXT_REGION 144 22 155 22 50 HELIX 161 22 167 COLOUR_TEXT_REGION 161 22 167 22 50 HELIX 193 22 207 COLOUR_TEXT_REGION 193 22 207 22 50