SILENT_MODE BLOCK_FILE jp_wyS4KWK.concise.blc MAX_NSEQ 362 MAX_INPUT_LEN 364 OUTPUT_FILE jp_wyS4KWK.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 288 351 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 352 288 361 H SPACE SUB_CHARS 1 352 288 361 E SPACE SUB_CHARS 1 352 288 361 - SPACE STRAND 6 355 11 COLOUR_TEXT_REGION 6 355 11 355 51 STRAND 19 355 25 COLOUR_TEXT_REGION 19 355 25 355 51 STRAND 30 355 33 COLOUR_TEXT_REGION 30 355 33 355 51 STRAND 45 355 49 COLOUR_TEXT_REGION 45 355 49 355 51 STRAND 52 355 59 COLOUR_TEXT_REGION 52 355 59 355 51 STRAND 70 355 75 COLOUR_TEXT_REGION 70 355 75 355 51 STRAND 81 355 84 COLOUR_TEXT_REGION 81 355 84 355 51 STRAND 96 355 101 COLOUR_TEXT_REGION 96 355 101 355 51 STRAND 104 355 109 COLOUR_TEXT_REGION 104 355 109 355 51 STRAND 119 355 122 COLOUR_TEXT_REGION 119 355 122 355 51 STRAND 129 355 131 COLOUR_TEXT_REGION 129 355 131 355 51 STRAND 145 355 146 COLOUR_TEXT_REGION 145 355 146 355 51 STRAND 152 355 155 COLOUR_TEXT_REGION 152 355 155 355 51 STRAND 198 355 201 COLOUR_TEXT_REGION 198 355 201 355 51 STRAND 212 355 215 COLOUR_TEXT_REGION 212 355 215 355 51 STRAND 237 355 241 COLOUR_TEXT_REGION 237 355 241 355 51 STRAND 245 355 249 COLOUR_TEXT_REGION 245 355 249 355 51 STRAND 259 355 264 COLOUR_TEXT_REGION 259 355 264 355 51 STRAND 269 355 272 COLOUR_TEXT_REGION 269 355 272 355 51 STRAND 6 360 11 COLOUR_TEXT_REGION 6 360 11 360 51 STRAND 18 360 25 COLOUR_TEXT_REGION 18 360 25 360 51 STRAND 31 360 32 COLOUR_TEXT_REGION 31 360 32 360 51 STRAND 45 360 49 COLOUR_TEXT_REGION 45 360 49 360 51 STRAND 52 360 59 COLOUR_TEXT_REGION 52 360 59 360 51 STRAND 70 360 75 COLOUR_TEXT_REGION 70 360 75 360 51 STRAND 82 360 83 COLOUR_TEXT_REGION 82 360 83 360 51 STRAND 96 360 100 COLOUR_TEXT_REGION 96 360 100 360 51 STRAND 103 360 109 COLOUR_TEXT_REGION 103 360 109 360 51 STRAND 119 360 122 COLOUR_TEXT_REGION 119 360 122 360 51 STRAND 129 360 131 COLOUR_TEXT_REGION 129 360 131 360 51 STRAND 144 360 147 COLOUR_TEXT_REGION 144 360 147 360 51 STRAND 151 360 156 COLOUR_TEXT_REGION 151 360 156 360 51 STRAND 166 360 168 COLOUR_TEXT_REGION 166 360 168 360 51 STRAND 192 360 194 COLOUR_TEXT_REGION 192 360 194 360 51 STRAND 198 360 201 COLOUR_TEXT_REGION 198 360 201 360 51 STRAND 211 360 216 COLOUR_TEXT_REGION 211 360 216 360 51 STRAND 223 360 224 COLOUR_TEXT_REGION 223 360 224 360 51 STRAND 237 360 241 COLOUR_TEXT_REGION 237 360 241 360 51 STRAND 245 360 249 COLOUR_TEXT_REGION 245 360 249 360 51 STRAND 259 360 263 COLOUR_TEXT_REGION 259 360 263 360 51 STRAND 270 360 272 COLOUR_TEXT_REGION 270 360 272 360 51 STRAND 283 360 287 COLOUR_TEXT_REGION 283 360 287 360 51 STRAND 6 361 11 COLOUR_TEXT_REGION 6 361 11 361 51 STRAND 20 361 25 COLOUR_TEXT_REGION 20 361 25 361 51 STRAND 30 361 33 COLOUR_TEXT_REGION 30 361 33 361 51 STRAND 44 361 49 COLOUR_TEXT_REGION 44 361 49 361 51 STRAND 52 361 59 COLOUR_TEXT_REGION 52 361 59 361 51 STRAND 69 361 75 COLOUR_TEXT_REGION 69 361 75 361 51 STRAND 81 361 84 COLOUR_TEXT_REGION 81 361 84 361 51 STRAND 96 361 101 COLOUR_TEXT_REGION 96 361 101 361 51 STRAND 106 361 108 COLOUR_TEXT_REGION 106 361 108 361 51 STRAND 120 361 123 COLOUR_TEXT_REGION 120 361 123 361 51 STRAND 198 361 201 COLOUR_TEXT_REGION 198 361 201 361 51 STRAND 246 361 250 COLOUR_TEXT_REGION 246 361 250 361 51 STRAND 259 361 264 COLOUR_TEXT_REGION 259 361 264 361 51 STRAND 269 361 272 COLOUR_TEXT_REGION 269 361 272 361 51