SILENT_MODE BLOCK_FILE jp_R5Y6Wlw.concise.blc MAX_NSEQ 619 MAX_INPUT_LEN 621 OUTPUT_FILE jp_R5Y6Wlw.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 436 608 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 609 436 618 H SPACE SUB_CHARS 1 609 436 618 E SPACE SUB_CHARS 1 609 436 618 - SPACE STRAND 29 612 30 COLOUR_TEXT_REGION 29 612 30 612 51 STRAND 120 612 125 COLOUR_TEXT_REGION 120 612 125 612 51 STRAND 136 612 142 COLOUR_TEXT_REGION 136 612 142 612 51 STRAND 150 612 155 COLOUR_TEXT_REGION 150 612 155 612 51 STRAND 161 612 166 COLOUR_TEXT_REGION 161 612 166 612 51 STRAND 177 612 181 COLOUR_TEXT_REGION 177 612 181 612 51 STRAND 185 612 190 COLOUR_TEXT_REGION 185 612 190 612 51 STRAND 195 612 199 COLOUR_TEXT_REGION 195 612 199 612 51 STRAND 203 612 210 COLOUR_TEXT_REGION 203 612 210 612 51 STRAND 214 612 215 COLOUR_TEXT_REGION 214 612 215 612 51 STRAND 220 612 225 COLOUR_TEXT_REGION 220 612 225 612 51 STRAND 230 612 235 COLOUR_TEXT_REGION 230 612 235 612 51 STRAND 248 612 254 COLOUR_TEXT_REGION 248 612 254 612 51 STRAND 264 612 271 COLOUR_TEXT_REGION 264 612 271 612 51 STRAND 276 612 280 COLOUR_TEXT_REGION 276 612 280 612 51 STRAND 289 612 292 COLOUR_TEXT_REGION 289 612 292 612 51 STRAND 359 612 366 COLOUR_TEXT_REGION 359 612 366 612 51 STRAND 377 612 379 COLOUR_TEXT_REGION 377 612 379 612 51 STRAND 421 612 423 COLOUR_TEXT_REGION 421 612 423 612 51 HELIX 11 612 19 COLOUR_TEXT_REGION 11 612 19 612 50 HELIX 33 612 36 COLOUR_TEXT_REGION 33 612 36 612 50 HELIX 38 612 46 COLOUR_TEXT_REGION 38 612 46 612 50 HELIX 52 612 59 COLOUR_TEXT_REGION 52 612 59 612 50 HELIX 70 612 73 COLOUR_TEXT_REGION 70 612 73 612 50 HELIX 80 612 97 COLOUR_TEXT_REGION 80 612 97 612 50 HELIX 319 612 328 COLOUR_TEXT_REGION 319 612 328 612 50 HELIX 331 612 354 COLOUR_TEXT_REGION 331 612 354 612 50 HELIX 385 612 391 COLOUR_TEXT_REGION 385 612 391 612 50 STRAND 29 617 30 COLOUR_TEXT_REGION 29 617 30 617 51 STRAND 120 617 125 COLOUR_TEXT_REGION 120 617 125 617 51 STRAND 136 617 142 COLOUR_TEXT_REGION 136 617 142 617 51 STRAND 150 617 155 COLOUR_TEXT_REGION 150 617 155 617 51 STRAND 161 617 166 COLOUR_TEXT_REGION 161 617 166 617 51 STRAND 177 617 181 COLOUR_TEXT_REGION 177 617 181 617 51 STRAND 185 617 190 COLOUR_TEXT_REGION 185 617 190 617 51 STRAND 195 617 199 COLOUR_TEXT_REGION 195 617 199 617 51 STRAND 203 617 210 COLOUR_TEXT_REGION 203 617 210 617 51 STRAND 214 617 216 COLOUR_TEXT_REGION 214 617 216 617 51 STRAND 220 617 225 COLOUR_TEXT_REGION 220 617 225 617 51 STRAND 229 617 235 COLOUR_TEXT_REGION 229 617 235 617 51 STRAND 247 617 254 COLOUR_TEXT_REGION 247 617 254 617 51 STRAND 265 617 271 COLOUR_TEXT_REGION 265 617 271 617 51 STRAND 276 617 280 COLOUR_TEXT_REGION 276 617 280 617 51 STRAND 289 617 292 COLOUR_TEXT_REGION 289 617 292 617 51 STRAND 359 617 366 COLOUR_TEXT_REGION 359 617 366 617 51 STRAND 377 617 380 COLOUR_TEXT_REGION 377 617 380 617 51 STRAND 421 617 423 COLOUR_TEXT_REGION 421 617 423 617 51 STRAND 434 617 434 COLOUR_TEXT_REGION 434 617 434 617 51 HELIX 11 617 18 COLOUR_TEXT_REGION 11 617 18 617 50 HELIX 33 617 36 COLOUR_TEXT_REGION 33 617 36 617 50 HELIX 38 617 45 COLOUR_TEXT_REGION 38 617 45 617 50 HELIX 52 617 58 COLOUR_TEXT_REGION 52 617 58 617 50 HELIX 69 617 74 COLOUR_TEXT_REGION 69 617 74 617 50 HELIX 80 617 94 COLOUR_TEXT_REGION 80 617 94 617 50 HELIX 319 617 328 COLOUR_TEXT_REGION 319 617 328 617 50 HELIX 331 617 354 COLOUR_TEXT_REGION 331 617 354 617 50 HELIX 385 617 391 COLOUR_TEXT_REGION 385 617 391 617 50 HELIX 426 617 428 COLOUR_TEXT_REGION 426 617 428 617 50 STRAND 29 618 30 COLOUR_TEXT_REGION 29 618 30 618 51 STRAND 120 618 125 COLOUR_TEXT_REGION 120 618 125 618 51 STRAND 136 618 139 COLOUR_TEXT_REGION 136 618 139 618 51 STRAND 150 618 155 COLOUR_TEXT_REGION 150 618 155 618 51 STRAND 160 618 164 COLOUR_TEXT_REGION 160 618 164 618 51 STRAND 177 618 181 COLOUR_TEXT_REGION 177 618 181 618 51 STRAND 186 618 189 COLOUR_TEXT_REGION 186 618 189 618 51 STRAND 195 618 200 COLOUR_TEXT_REGION 195 618 200 618 51 STRAND 203 618 209 COLOUR_TEXT_REGION 203 618 209 618 51 STRAND 214 618 215 COLOUR_TEXT_REGION 214 618 215 618 51 STRAND 220 618 224 COLOUR_TEXT_REGION 220 618 224 618 51 STRAND 230 618 236 COLOUR_TEXT_REGION 230 618 236 618 51 STRAND 250 618 255 COLOUR_TEXT_REGION 250 618 255 618 51 STRAND 263 618 271 COLOUR_TEXT_REGION 263 618 271 618 51 STRAND 276 618 279 COLOUR_TEXT_REGION 276 618 279 618 51 STRAND 288 618 291 COLOUR_TEXT_REGION 288 618 291 618 51 STRAND 304 618 306 COLOUR_TEXT_REGION 304 618 306 618 51 STRAND 360 618 361 COLOUR_TEXT_REGION 360 618 361 618 51 STRAND 363 618 366 COLOUR_TEXT_REGION 363 618 366 618 51 STRAND 377 618 378 COLOUR_TEXT_REGION 377 618 378 618 51 STRAND 420 618 423 COLOUR_TEXT_REGION 420 618 423 618 51 STRAND 435 618 435 COLOUR_TEXT_REGION 435 618 435 618 51 HELIX 11 618 19 COLOUR_TEXT_REGION 11 618 19 618 50 HELIX 33 618 36 COLOUR_TEXT_REGION 33 618 36 618 50 HELIX 41 618 46 COLOUR_TEXT_REGION 41 618 46 618 50 HELIX 51 618 60 COLOUR_TEXT_REGION 51 618 60 618 50 HELIX 65 618 67 COLOUR_TEXT_REGION 65 618 67 618 50 HELIX 80 618 99 COLOUR_TEXT_REGION 80 618 99 618 50 HELIX 321 618 328 COLOUR_TEXT_REGION 321 618 328 618 50 HELIX 331 618 354 COLOUR_TEXT_REGION 331 618 354 618 50 HELIX 385 618 391 COLOUR_TEXT_REGION 385 618 391 618 50