SILENT_MODE BLOCK_FILE jp_o7ItMRu.concise.blc MAX_NSEQ 1054 MAX_INPUT_LEN 1056 OUTPUT_FILE jp_o7ItMRu.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 138 1043 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1044 138 1053 H SPACE SUB_CHARS 1 1044 138 1053 E SPACE SUB_CHARS 1 1044 138 1053 - SPACE STRAND 13 1047 20 COLOUR_TEXT_REGION 13 1047 20 1047 51 STRAND 44 1047 48 COLOUR_TEXT_REGION 44 1047 48 1047 51 STRAND 75 1047 79 COLOUR_TEXT_REGION 75 1047 79 1047 51 STRAND 108 1047 111 COLOUR_TEXT_REGION 108 1047 111 1047 51 STRAND 121 1047 132 COLOUR_TEXT_REGION 121 1047 132 1047 51 HELIX 23 1047 31 COLOUR_TEXT_REGION 23 1047 31 1047 50 HELIX 54 1047 69 COLOUR_TEXT_REGION 54 1047 69 1047 50 HELIX 91 1047 102 COLOUR_TEXT_REGION 91 1047 102 1047 50 STRAND 14 1052 20 COLOUR_TEXT_REGION 14 1052 20 1052 51 STRAND 44 1052 48 COLOUR_TEXT_REGION 44 1052 48 1052 51 STRAND 75 1052 79 COLOUR_TEXT_REGION 75 1052 79 1052 51 STRAND 108 1052 111 COLOUR_TEXT_REGION 108 1052 111 1052 51 STRAND 121 1052 125 COLOUR_TEXT_REGION 121 1052 125 1052 51 STRAND 128 1052 132 COLOUR_TEXT_REGION 128 1052 132 1052 51 HELIX 22 1052 30 COLOUR_TEXT_REGION 22 1052 30 1052 50 HELIX 54 1052 67 COLOUR_TEXT_REGION 54 1052 67 1052 50 HELIX 91 1052 102 COLOUR_TEXT_REGION 91 1052 102 1052 50 STRAND 13 1053 20 COLOUR_TEXT_REGION 13 1053 20 1053 51 STRAND 43 1053 48 COLOUR_TEXT_REGION 43 1053 48 1053 51 STRAND 75 1053 80 COLOUR_TEXT_REGION 75 1053 80 1053 51 STRAND 107 1053 110 COLOUR_TEXT_REGION 107 1053 110 1053 51 STRAND 121 1053 132 COLOUR_TEXT_REGION 121 1053 132 1053 51 HELIX 23 1053 31 COLOUR_TEXT_REGION 23 1053 31 1053 50 HELIX 54 1053 70 COLOUR_TEXT_REGION 54 1053 70 1053 50 HELIX 91 1053 101 COLOUR_TEXT_REGION 91 1053 101 1053 50