SILENT_MODE BLOCK_FILE jp_xaGmh2w.concise.blc MAX_NSEQ 339 MAX_INPUT_LEN 341 OUTPUT_FILE jp_xaGmh2w.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 156 328 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 329 156 338 H SPACE SUB_CHARS 1 329 156 338 E SPACE SUB_CHARS 1 329 156 338 - SPACE STRAND 4 332 12 COLOUR_TEXT_REGION 4 332 12 332 51 STRAND 17 332 19 COLOUR_TEXT_REGION 17 332 19 332 51 STRAND 25 332 32 COLOUR_TEXT_REGION 25 332 32 332 51 STRAND 41 332 46 COLOUR_TEXT_REGION 41 332 46 332 51 STRAND 49 332 51 COLOUR_TEXT_REGION 49 332 51 332 51 STRAND 58 332 64 COLOUR_TEXT_REGION 58 332 64 332 51 STRAND 72 332 78 COLOUR_TEXT_REGION 72 332 78 332 51 STRAND 93 332 100 COLOUR_TEXT_REGION 93 332 100 332 51 STRAND 105 332 110 COLOUR_TEXT_REGION 105 332 110 332 51 STRAND 115 332 119 COLOUR_TEXT_REGION 115 332 119 332 51 STRAND 124 332 129 COLOUR_TEXT_REGION 124 332 129 332 51 STRAND 135 332 139 COLOUR_TEXT_REGION 135 332 139 332 51 STRAND 145 332 154 COLOUR_TEXT_REGION 145 332 154 332 51 STRAND 3 337 11 COLOUR_TEXT_REGION 3 337 11 337 51 STRAND 16 337 19 COLOUR_TEXT_REGION 16 337 19 337 51 STRAND 25 337 31 COLOUR_TEXT_REGION 25 337 31 337 51 STRAND 42 337 45 COLOUR_TEXT_REGION 42 337 45 337 51 STRAND 49 337 51 COLOUR_TEXT_REGION 49 337 51 337 51 STRAND 58 337 64 COLOUR_TEXT_REGION 58 337 64 337 51 STRAND 71 337 78 COLOUR_TEXT_REGION 71 337 78 337 51 STRAND 93 337 100 COLOUR_TEXT_REGION 93 337 100 337 51 STRAND 104 337 110 COLOUR_TEXT_REGION 104 337 110 337 51 STRAND 115 337 119 COLOUR_TEXT_REGION 115 337 119 337 51 STRAND 124 337 126 COLOUR_TEXT_REGION 124 337 126 337 51 STRAND 135 337 138 COLOUR_TEXT_REGION 135 337 138 337 51 STRAND 145 337 154 COLOUR_TEXT_REGION 145 337 154 337 51 STRAND 4 338 12 COLOUR_TEXT_REGION 4 338 12 338 51 STRAND 17 338 19 COLOUR_TEXT_REGION 17 338 19 338 51 STRAND 25 338 32 COLOUR_TEXT_REGION 25 338 32 338 51 STRAND 37 338 38 COLOUR_TEXT_REGION 37 338 38 338 51 STRAND 41 338 46 COLOUR_TEXT_REGION 41 338 46 338 51 STRAND 48 338 51 COLOUR_TEXT_REGION 48 338 51 338 51 STRAND 59 338 64 COLOUR_TEXT_REGION 59 338 64 338 51 STRAND 73 338 78 COLOUR_TEXT_REGION 73 338 78 338 51 STRAND 94 338 100 COLOUR_TEXT_REGION 94 338 100 338 51 STRAND 105 338 110 COLOUR_TEXT_REGION 105 338 110 338 51 STRAND 115 338 119 COLOUR_TEXT_REGION 115 338 119 338 51 STRAND 124 338 129 COLOUR_TEXT_REGION 124 338 129 338 51 STRAND 135 338 139 COLOUR_TEXT_REGION 135 338 139 338 51 STRAND 146 338 154 COLOUR_TEXT_REGION 146 338 154 338 51