SILENT_MODE
BLOCK_FILE jp_crd58Ki.concise.blc
MAX_NSEQ 562
MAX_INPUT_LEN 564
OUTPUT_FILE jp_crd58Ki.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 80 551   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 552 80 561 H SPACE
SUB_CHARS 1 552 80 561 E SPACE
SUB_CHARS 1 552 80 561 - SPACE
STRAND 30 555 34
COLOUR_TEXT_REGION 30 555 34 555 51
STRAND 45 555 46
COLOUR_TEXT_REGION 45 555 46 555 51
STRAND 56 555 60
COLOUR_TEXT_REGION 56 555 60 555 51
STRAND 67 555 68
COLOUR_TEXT_REGION 67 555 68 555 51
HELIX 5 555 22
COLOUR_TEXT_REGION 5 555 22 555 50
STRAND 30 560 34
COLOUR_TEXT_REGION 30 560 34 560 51
STRAND 56 560 59
COLOUR_TEXT_REGION 56 560 59 560 51
HELIX 5 560 21
COLOUR_TEXT_REGION 5 560 21 560 50
STRAND 30 561 31
COLOUR_TEXT_REGION 30 561 31 561 51
STRAND 44 561 47
COLOUR_TEXT_REGION 44 561 47 561 51
STRAND 57 561 61
COLOUR_TEXT_REGION 57 561 61 561 51
STRAND 66 561 68
COLOUR_TEXT_REGION 66 561 68 561 51
HELIX 6 561 22
COLOUR_TEXT_REGION 6 561 22 561 50