SILENT_MODE BLOCK_FILE jp_bBQQwwS.concise.blc MAX_NSEQ 978 MAX_INPUT_LEN 980 OUTPUT_FILE jp_bBQQwwS.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 142 967 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 968 142 977 H SPACE SUB_CHARS 1 968 142 977 E SPACE SUB_CHARS 1 968 142 977 - SPACE STRAND 33 971 38 COLOUR_TEXT_REGION 33 971 38 971 51 STRAND 44 971 49 COLOUR_TEXT_REGION 44 971 49 971 51 STRAND 100 971 102 COLOUR_TEXT_REGION 100 971 102 971 51 STRAND 106 971 110 COLOUR_TEXT_REGION 106 971 110 971 51 STRAND 113 971 120 COLOUR_TEXT_REGION 113 971 120 971 51 HELIX 12 971 28 COLOUR_TEXT_REGION 12 971 28 971 50 HELIX 58 971 70 COLOUR_TEXT_REGION 58 971 70 971 50 HELIX 75 971 82 COLOUR_TEXT_REGION 75 971 82 971 50 HELIX 126 971 140 COLOUR_TEXT_REGION 126 971 140 971 50 STRAND 33 976 38 COLOUR_TEXT_REGION 33 976 38 976 51 STRAND 44 976 49 COLOUR_TEXT_REGION 44 976 49 976 51 STRAND 100 976 102 COLOUR_TEXT_REGION 100 976 102 976 51 STRAND 106 976 110 COLOUR_TEXT_REGION 106 976 110 976 51 STRAND 113 976 120 COLOUR_TEXT_REGION 113 976 120 976 51 HELIX 12 976 28 COLOUR_TEXT_REGION 12 976 28 976 50 HELIX 58 976 70 COLOUR_TEXT_REGION 58 976 70 976 50 HELIX 75 976 82 COLOUR_TEXT_REGION 75 976 82 976 50 HELIX 125 976 140 COLOUR_TEXT_REGION 125 976 140 976 50 STRAND 33 977 38 COLOUR_TEXT_REGION 33 977 38 977 51 STRAND 44 977 49 COLOUR_TEXT_REGION 44 977 49 977 51 STRAND 100 977 102 COLOUR_TEXT_REGION 100 977 102 977 51 STRAND 105 977 110 COLOUR_TEXT_REGION 105 977 110 977 51 STRAND 113 977 119 COLOUR_TEXT_REGION 113 977 119 977 51 HELIX 12 977 28 COLOUR_TEXT_REGION 12 977 28 977 50 HELIX 58 977 68 COLOUR_TEXT_REGION 58 977 68 977 50 HELIX 76 977 82 COLOUR_TEXT_REGION 76 977 82 977 50 HELIX 88 977 90 COLOUR_TEXT_REGION 88 977 90 977 50 HELIX 126 977 140 COLOUR_TEXT_REGION 126 977 140 977 50