SILENT_MODE BLOCK_FILE jp_rn3nzXr.concise.blc MAX_NSEQ 578 MAX_INPUT_LEN 580 OUTPUT_FILE jp_rn3nzXr.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 507 567 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 568 507 577 H SPACE SUB_CHARS 1 568 507 577 E SPACE SUB_CHARS 1 568 507 577 - SPACE STRAND 30 571 32 COLOUR_TEXT_REGION 30 571 32 571 51 STRAND 144 571 149 COLOUR_TEXT_REGION 144 571 149 571 51 STRAND 225 571 225 COLOUR_TEXT_REGION 225 571 225 571 51 STRAND 473 571 476 COLOUR_TEXT_REGION 473 571 476 571 51 HELIX 7 571 18 COLOUR_TEXT_REGION 7 571 18 571 50 HELIX 24 571 29 COLOUR_TEXT_REGION 24 571 29 571 50 HELIX 39 571 50 COLOUR_TEXT_REGION 39 571 50 571 50 HELIX 53 571 65 COLOUR_TEXT_REGION 53 571 65 571 50 HELIX 70 571 74 COLOUR_TEXT_REGION 70 571 74 571 50 HELIX 80 571 110 COLOUR_TEXT_REGION 80 571 110 571 50 HELIX 163 571 209 COLOUR_TEXT_REGION 163 571 209 571 50 HELIX 217 571 224 COLOUR_TEXT_REGION 217 571 224 571 50 HELIX 226 571 226 COLOUR_TEXT_REGION 226 571 226 571 50 HELIX 236 571 260 COLOUR_TEXT_REGION 236 571 260 571 50 HELIX 274 571 299 COLOUR_TEXT_REGION 274 571 299 571 50 HELIX 318 571 327 COLOUR_TEXT_REGION 318 571 327 571 50 HELIX 333 571 347 COLOUR_TEXT_REGION 333 571 347 571 50 HELIX 351 571 363 COLOUR_TEXT_REGION 351 571 363 571 50 HELIX 372 571 387 COLOUR_TEXT_REGION 372 571 387 571 50 HELIX 393 571 419 COLOUR_TEXT_REGION 393 571 419 571 50 HELIX 423 571 432 COLOUR_TEXT_REGION 423 571 432 571 50 HELIX 440 571 463 COLOUR_TEXT_REGION 440 571 463 571 50 HELIX 481 571 497 COLOUR_TEXT_REGION 481 571 497 571 50 STRAND 30 576 33 COLOUR_TEXT_REGION 30 576 33 576 51 STRAND 143 576 150 COLOUR_TEXT_REGION 143 576 150 576 51 STRAND 222 576 226 COLOUR_TEXT_REGION 222 576 226 576 51 STRAND 316 576 317 COLOUR_TEXT_REGION 316 576 317 576 51 STRAND 473 576 476 COLOUR_TEXT_REGION 473 576 476 576 51 STRAND 497 576 497 COLOUR_TEXT_REGION 497 576 497 576 51 HELIX 8 576 18 COLOUR_TEXT_REGION 8 576 18 576 50 HELIX 29 576 29 COLOUR_TEXT_REGION 29 576 29 576 50 HELIX 38 576 50 COLOUR_TEXT_REGION 38 576 50 576 50 HELIX 53 576 65 COLOUR_TEXT_REGION 53 576 65 576 50 HELIX 69 576 75 COLOUR_TEXT_REGION 69 576 75 576 50 HELIX 79 576 112 COLOUR_TEXT_REGION 79 576 112 576 50 HELIX 163 576 182 COLOUR_TEXT_REGION 163 576 182 576 50 HELIX 184 576 209 COLOUR_TEXT_REGION 184 576 209 576 50 HELIX 217 576 221 COLOUR_TEXT_REGION 217 576 221 576 50 HELIX 235 576 259 COLOUR_TEXT_REGION 235 576 259 576 50 HELIX 273 576 299 COLOUR_TEXT_REGION 273 576 299 576 50 HELIX 318 576 327 COLOUR_TEXT_REGION 318 576 327 576 50 HELIX 332 576 348 COLOUR_TEXT_REGION 332 576 348 576 50 HELIX 350 576 362 COLOUR_TEXT_REGION 350 576 362 576 50 HELIX 371 576 389 COLOUR_TEXT_REGION 371 576 389 576 50 HELIX 392 576 403 COLOUR_TEXT_REGION 392 576 403 576 50 HELIX 405 576 420 COLOUR_TEXT_REGION 405 576 420 576 50 HELIX 423 576 432 COLOUR_TEXT_REGION 423 576 432 576 50 HELIX 440 576 463 COLOUR_TEXT_REGION 440 576 463 576 50 HELIX 481 576 496 COLOUR_TEXT_REGION 481 576 496 576 50 STRAND 31 577 32 COLOUR_TEXT_REGION 31 577 32 577 51 STRAND 40 577 40 COLOUR_TEXT_REGION 40 577 40 577 51 STRAND 71 577 73 COLOUR_TEXT_REGION 71 577 73 577 51 STRAND 106 577 106 COLOUR_TEXT_REGION 106 577 106 577 51 STRAND 260 577 262 COLOUR_TEXT_REGION 260 577 262 577 51 STRAND 275 577 276 COLOUR_TEXT_REGION 275 577 276 577 51 STRAND 474 577 475 COLOUR_TEXT_REGION 474 577 475 577 51 HELIX 7 577 19 COLOUR_TEXT_REGION 7 577 19 577 50 HELIX 22 577 30 COLOUR_TEXT_REGION 22 577 30 577 50 HELIX 41 577 50 COLOUR_TEXT_REGION 41 577 50 577 50 HELIX 54 577 65 COLOUR_TEXT_REGION 54 577 65 577 50 HELIX 87 577 102 COLOUR_TEXT_REGION 87 577 102 577 50 HELIX 161 577 188 COLOUR_TEXT_REGION 161 577 188 577 50 HELIX 194 577 209 COLOUR_TEXT_REGION 194 577 209 577 50 HELIX 217 577 228 COLOUR_TEXT_REGION 217 577 228 577 50 HELIX 245 577 259 COLOUR_TEXT_REGION 245 577 259 577 50 HELIX 277 577 278 COLOUR_TEXT_REGION 277 577 278 577 50 HELIX 281 577 288 COLOUR_TEXT_REGION 281 577 288 577 50 HELIX 292 577 293 COLOUR_TEXT_REGION 292 577 293 577 50 HELIX 310 577 310 COLOUR_TEXT_REGION 310 577 310 577 50 HELIX 318 577 327 COLOUR_TEXT_REGION 318 577 327 577 50 HELIX 334 577 346 COLOUR_TEXT_REGION 334 577 346 577 50 HELIX 354 577 366 COLOUR_TEXT_REGION 354 577 366 577 50 HELIX 373 577 384 COLOUR_TEXT_REGION 373 577 384 577 50 HELIX 393 577 419 COLOUR_TEXT_REGION 393 577 419 577 50 HELIX 423 577 432 COLOUR_TEXT_REGION 423 577 432 577 50 HELIX 441 577 463 COLOUR_TEXT_REGION 441 577 463 577 50 HELIX 481 577 497 COLOUR_TEXT_REGION 481 577 497 577 50 HELIX 500 577 500 COLOUR_TEXT_REGION 500 577 500 577 50 HELIX 502 577 502 COLOUR_TEXT_REGION 502 577 502 577 50