SILENT_MODE BLOCK_FILE jp_tZ6IxPV.concise.blc MAX_NSEQ 291 MAX_INPUT_LEN 293 OUTPUT_FILE jp_tZ6IxPV.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 80 280 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 281 80 290 H SPACE SUB_CHARS 1 281 80 290 E SPACE SUB_CHARS 1 281 80 290 - SPACE STRAND 4 284 9 COLOUR_TEXT_REGION 4 284 9 284 51 STRAND 37 284 41 COLOUR_TEXT_REGION 37 284 41 284 51 STRAND 48 284 52 COLOUR_TEXT_REGION 48 284 52 284 51 STRAND 56 284 60 COLOUR_TEXT_REGION 56 284 60 284 51 STRAND 65 284 70 COLOUR_TEXT_REGION 65 284 70 284 51 HELIX 20 284 31 COLOUR_TEXT_REGION 20 284 31 284 50 STRAND 4 289 9 COLOUR_TEXT_REGION 4 289 9 289 51 STRAND 37 289 42 COLOUR_TEXT_REGION 37 289 42 289 51 STRAND 48 289 52 COLOUR_TEXT_REGION 48 289 52 289 51 STRAND 56 289 61 COLOUR_TEXT_REGION 56 289 61 289 51 STRAND 65 289 69 COLOUR_TEXT_REGION 65 289 69 289 51 HELIX 20 289 31 COLOUR_TEXT_REGION 20 289 31 289 50 STRAND 3 290 9 COLOUR_TEXT_REGION 3 290 9 290 51 STRAND 37 290 39 COLOUR_TEXT_REGION 37 290 39 290 51 STRAND 49 290 52 COLOUR_TEXT_REGION 49 290 52 290 51 STRAND 57 290 60 COLOUR_TEXT_REGION 57 290 60 290 51 STRAND 65 290 70 COLOUR_TEXT_REGION 65 290 70 290 51 HELIX 20 290 30 COLOUR_TEXT_REGION 20 290 30 290 50