SILENT_MODE BLOCK_FILE jp_D7gqNun.concise.blc MAX_NSEQ 861 MAX_INPUT_LEN 863 OUTPUT_FILE jp_D7gqNun.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 246 850 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 851 246 860 H SPACE SUB_CHARS 1 851 246 860 E SPACE SUB_CHARS 1 851 246 860 - SPACE STRAND 14 854 15 COLOUR_TEXT_REGION 14 854 15 854 51 STRAND 41 854 44 COLOUR_TEXT_REGION 41 854 44 854 51 STRAND 57 854 62 COLOUR_TEXT_REGION 57 854 62 854 51 STRAND 66 854 68 COLOUR_TEXT_REGION 66 854 68 854 51 STRAND 80 854 88 COLOUR_TEXT_REGION 80 854 88 854 51 STRAND 112 854 117 COLOUR_TEXT_REGION 112 854 117 854 51 STRAND 137 854 143 COLOUR_TEXT_REGION 137 854 143 854 51 STRAND 156 854 158 COLOUR_TEXT_REGION 156 854 158 854 51 STRAND 171 854 176 COLOUR_TEXT_REGION 171 854 176 854 51 STRAND 190 854 194 COLOUR_TEXT_REGION 190 854 194 854 51 STRAND 205 854 213 COLOUR_TEXT_REGION 205 854 213 854 51 STRAND 221 854 222 COLOUR_TEXT_REGION 221 854 222 854 51 HELIX 70 854 75 COLOUR_TEXT_REGION 70 854 75 854 50 HELIX 122 854 128 COLOUR_TEXT_REGION 122 854 128 854 50 HELIX 162 854 164 COLOUR_TEXT_REGION 162 854 164 854 50 STRAND 14 859 15 COLOUR_TEXT_REGION 14 859 15 859 51 STRAND 41 859 44 COLOUR_TEXT_REGION 41 859 44 859 51 STRAND 57 859 62 COLOUR_TEXT_REGION 57 859 62 859 51 STRAND 65 859 69 COLOUR_TEXT_REGION 65 859 69 859 51 STRAND 80 859 88 COLOUR_TEXT_REGION 80 859 88 859 51 STRAND 111 859 118 COLOUR_TEXT_REGION 111 859 118 859 51 STRAND 137 859 142 COLOUR_TEXT_REGION 137 859 142 859 51 STRAND 155 859 159 COLOUR_TEXT_REGION 155 859 159 859 51 STRAND 171 859 176 COLOUR_TEXT_REGION 171 859 176 859 51 STRAND 190 859 194 COLOUR_TEXT_REGION 190 859 194 859 51 STRAND 205 859 213 COLOUR_TEXT_REGION 205 859 213 859 51 STRAND 221 859 222 COLOUR_TEXT_REGION 221 859 222 859 51 HELIX 70 859 75 COLOUR_TEXT_REGION 70 859 75 859 50 HELIX 122 859 128 COLOUR_TEXT_REGION 122 859 128 859 50 HELIX 161 859 165 COLOUR_TEXT_REGION 161 859 165 859 50 STRAND 14 860 15 COLOUR_TEXT_REGION 14 860 15 860 51 STRAND 42 860 44 COLOUR_TEXT_REGION 42 860 44 860 51 STRAND 57 860 61 COLOUR_TEXT_REGION 57 860 61 860 51 STRAND 81 860 87 COLOUR_TEXT_REGION 81 860 87 860 51 STRAND 112 860 116 COLOUR_TEXT_REGION 112 860 116 860 51 STRAND 137 860 144 COLOUR_TEXT_REGION 137 860 144 860 51 STRAND 171 860 176 COLOUR_TEXT_REGION 171 860 176 860 51 STRAND 181 860 182 COLOUR_TEXT_REGION 181 860 182 860 51 STRAND 190 860 194 COLOUR_TEXT_REGION 190 860 194 860 51 STRAND 205 860 213 COLOUR_TEXT_REGION 205 860 213 860 51 STRAND 220 860 222 COLOUR_TEXT_REGION 220 860 222 860 51 STRAND 227 860 227 COLOUR_TEXT_REGION 227 860 227 860 51 HELIX 70 860 75 COLOUR_TEXT_REGION 70 860 75 860 50 HELIX 122 860 128 COLOUR_TEXT_REGION 122 860 128 860 50