SILENT_MODE BLOCK_FILE jp_Kuu0M4X.concise.blc MAX_NSEQ 462 MAX_INPUT_LEN 464 OUTPUT_FILE jp_Kuu0M4X.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 164 451 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 452 164 461 H SPACE SUB_CHARS 1 452 164 461 E SPACE SUB_CHARS 1 452 164 461 - SPACE STRAND 5 455 8 COLOUR_TEXT_REGION 5 455 8 455 51 STRAND 16 455 25 COLOUR_TEXT_REGION 16 455 25 455 51 STRAND 34 455 46 COLOUR_TEXT_REGION 34 455 46 455 51 STRAND 52 455 68 COLOUR_TEXT_REGION 52 455 68 455 51 STRAND 116 455 118 COLOUR_TEXT_REGION 116 455 118 455 51 STRAND 121 455 125 COLOUR_TEXT_REGION 121 455 125 455 51 STRAND 138 455 146 COLOUR_TEXT_REGION 138 455 146 455 51 STRAND 151 455 162 COLOUR_TEXT_REGION 151 455 162 455 51 HELIX 82 455 88 COLOUR_TEXT_REGION 82 455 88 455 50 STRAND 5 460 8 COLOUR_TEXT_REGION 5 460 8 460 51 STRAND 17 460 25 COLOUR_TEXT_REGION 17 460 25 460 51 STRAND 34 460 45 COLOUR_TEXT_REGION 34 460 45 460 51 STRAND 52 460 63 COLOUR_TEXT_REGION 52 460 63 460 51 STRAND 66 460 69 COLOUR_TEXT_REGION 66 460 69 460 51 STRAND 116 460 118 COLOUR_TEXT_REGION 116 460 118 460 51 STRAND 121 460 125 COLOUR_TEXT_REGION 121 460 125 460 51 STRAND 138 460 147 COLOUR_TEXT_REGION 138 460 147 460 51 STRAND 151 460 162 COLOUR_TEXT_REGION 151 460 162 460 51 HELIX 82 460 88 COLOUR_TEXT_REGION 82 460 88 460 50 STRAND 16 461 25 COLOUR_TEXT_REGION 16 461 25 461 51 STRAND 34 461 46 COLOUR_TEXT_REGION 34 461 46 461 51 STRAND 52 461 68 COLOUR_TEXT_REGION 52 461 68 461 51 STRAND 107 461 107 COLOUR_TEXT_REGION 107 461 107 461 51 STRAND 115 461 117 COLOUR_TEXT_REGION 115 461 117 461 51 STRAND 121 461 125 COLOUR_TEXT_REGION 121 461 125 461 51 STRAND 138 461 146 COLOUR_TEXT_REGION 138 461 146 461 51 STRAND 151 461 162 COLOUR_TEXT_REGION 151 461 162 461 51 HELIX 82 461 88 COLOUR_TEXT_REGION 82 461 88 461 50