SILENT_MODE
BLOCK_FILE jp_sc70KFi.concise.blc
MAX_NSEQ 668
MAX_INPUT_LEN 670
OUTPUT_FILE jp_sc70KFi.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 148 657   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 658 148 667 H SPACE
SUB_CHARS 1 658 148 667 E SPACE
SUB_CHARS 1 658 148 667 - SPACE
STRAND 3 661 5
COLOUR_TEXT_REGION 3 661 5 661 51
STRAND 11 661 14
COLOUR_TEXT_REGION 11 661 14 661 51
STRAND 19 661 22
COLOUR_TEXT_REGION 19 661 22 661 51
STRAND 34 661 39
COLOUR_TEXT_REGION 34 661 39 661 51
STRAND 46 661 51
COLOUR_TEXT_REGION 46 661 51 661 51
STRAND 58 661 62
COLOUR_TEXT_REGION 58 661 62 661 51
STRAND 91 661 98
COLOUR_TEXT_REGION 91 661 98 661 51
STRAND 107 661 111
COLOUR_TEXT_REGION 107 661 111 661 51
STRAND 114 661 117
COLOUR_TEXT_REGION 114 661 117 661 51
STRAND 122 661 128
COLOUR_TEXT_REGION 122 661 128 661 51
STRAND 135 661 137
COLOUR_TEXT_REGION 135 661 137 661 51
HELIX 77 661 82
COLOUR_TEXT_REGION 77 661 82 661 50
HELIX 144 661 144
COLOUR_TEXT_REGION 144 661 144 661 50
STRAND 3 666 6
COLOUR_TEXT_REGION 3 666 6 666 51
STRAND 11 666 14
COLOUR_TEXT_REGION 11 666 14 666 51
STRAND 19 666 21
COLOUR_TEXT_REGION 19 666 21 666 51
STRAND 34 666 39
COLOUR_TEXT_REGION 34 666 39 666 51
STRAND 46 666 51
COLOUR_TEXT_REGION 46 666 51 666 51
STRAND 58 666 62
COLOUR_TEXT_REGION 58 666 62 666 51
STRAND 91 666 98
COLOUR_TEXT_REGION 91 666 98 666 51
STRAND 108 666 111
COLOUR_TEXT_REGION 108 666 111 666 51
STRAND 114 666 117
COLOUR_TEXT_REGION 114 666 117 666 51
STRAND 122 666 127
COLOUR_TEXT_REGION 122 666 127 666 51
STRAND 136 666 138
COLOUR_TEXT_REGION 136 666 138 666 51
HELIX 77 666 82
COLOUR_TEXT_REGION 77 666 82 666 50
STRAND 11 667 14
COLOUR_TEXT_REGION 11 667 14 667 51
STRAND 19 667 22
COLOUR_TEXT_REGION 19 667 22 667 51
STRAND 34 667 39
COLOUR_TEXT_REGION 34 667 39 667 51
STRAND 46 667 51
COLOUR_TEXT_REGION 46 667 51 667 51
STRAND 58 667 63
COLOUR_TEXT_REGION 58 667 63 667 51
STRAND 91 667 99
COLOUR_TEXT_REGION 91 667 99 667 51
STRAND 107 667 111
COLOUR_TEXT_REGION 107 667 111 667 51
STRAND 113 667 118
COLOUR_TEXT_REGION 113 667 118 667 51
STRAND 122 667 128
COLOUR_TEXT_REGION 122 667 128 667 51
STRAND 134 667 137
COLOUR_TEXT_REGION 134 667 137 667 51
HELIX 77 667 82
COLOUR_TEXT_REGION 77 667 82 667 50
HELIX 142 667 145
COLOUR_TEXT_REGION 142 667 145 667 50