SILENT_MODE BLOCK_FILE jp_XfCrPeb.concise.blc MAX_NSEQ 1058 MAX_INPUT_LEN 1060 OUTPUT_FILE jp_XfCrPeb.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 161 1047 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1048 161 1057 H SPACE SUB_CHARS 1 1048 161 1057 E SPACE SUB_CHARS 1 1048 161 1057 - SPACE STRAND 13 1051 14 COLOUR_TEXT_REGION 13 1051 14 1051 51 STRAND 29 1051 31 COLOUR_TEXT_REGION 29 1051 31 1051 51 STRAND 39 1051 53 COLOUR_TEXT_REGION 39 1051 53 1051 51 STRAND 57 1051 60 COLOUR_TEXT_REGION 57 1051 60 1051 51 STRAND 65 1051 69 COLOUR_TEXT_REGION 65 1051 69 1051 51 STRAND 74 1051 78 COLOUR_TEXT_REGION 74 1051 78 1051 51 STRAND 85 1051 93 COLOUR_TEXT_REGION 85 1051 93 1051 51 STRAND 112 1051 115 COLOUR_TEXT_REGION 112 1051 115 1051 51 HELIX 97 1051 101 COLOUR_TEXT_REGION 97 1051 101 1051 50 HELIX 120 1051 136 COLOUR_TEXT_REGION 120 1051 136 1051 50 HELIX 141 1051 159 COLOUR_TEXT_REGION 141 1051 159 1051 50 STRAND 13 1056 14 COLOUR_TEXT_REGION 13 1056 14 1056 51 STRAND 18 1056 19 COLOUR_TEXT_REGION 18 1056 19 1056 51 STRAND 39 1056 46 COLOUR_TEXT_REGION 39 1056 46 1056 51 STRAND 48 1056 53 COLOUR_TEXT_REGION 48 1056 53 1056 51 STRAND 57 1056 60 COLOUR_TEXT_REGION 57 1056 60 1056 51 STRAND 65 1056 69 COLOUR_TEXT_REGION 65 1056 69 1056 51 STRAND 74 1056 78 COLOUR_TEXT_REGION 74 1056 78 1056 51 STRAND 85 1056 93 COLOUR_TEXT_REGION 85 1056 93 1056 51 STRAND 112 1056 114 COLOUR_TEXT_REGION 112 1056 114 1056 51 HELIX 97 1056 103 COLOUR_TEXT_REGION 97 1056 103 1056 50 HELIX 121 1056 136 COLOUR_TEXT_REGION 121 1056 136 1056 50 HELIX 142 1056 159 COLOUR_TEXT_REGION 142 1056 159 1056 50 STRAND 13 1057 13 COLOUR_TEXT_REGION 13 1057 13 1057 51 STRAND 28 1057 31 COLOUR_TEXT_REGION 28 1057 31 1057 51 STRAND 39 1057 53 COLOUR_TEXT_REGION 39 1057 53 1057 51 STRAND 57 1057 60 COLOUR_TEXT_REGION 57 1057 60 1057 51 STRAND 65 1057 69 COLOUR_TEXT_REGION 65 1057 69 1057 51 STRAND 74 1057 78 COLOUR_TEXT_REGION 74 1057 78 1057 51 STRAND 86 1057 92 COLOUR_TEXT_REGION 86 1057 92 1057 51 STRAND 111 1057 115 COLOUR_TEXT_REGION 111 1057 115 1057 51 HELIX 119 1057 135 COLOUR_TEXT_REGION 119 1057 135 1057 50 HELIX 141 1057 159 COLOUR_TEXT_REGION 141 1057 159 1057 50