SILENT_MODE BLOCK_FILE jp_eTrO9pU.concise.blc MAX_NSEQ 471 MAX_INPUT_LEN 473 OUTPUT_FILE jp_eTrO9pU.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 76 460 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 461 76 470 H SPACE SUB_CHARS 1 461 76 470 E SPACE SUB_CHARS 1 461 76 470 - SPACE STRAND 3 464 7 COLOUR_TEXT_REGION 3 464 7 464 51 STRAND 26 464 27 COLOUR_TEXT_REGION 26 464 27 464 51 STRAND 34 464 38 COLOUR_TEXT_REGION 34 464 38 464 51 STRAND 50 464 53 COLOUR_TEXT_REGION 50 464 53 464 51 STRAND 60 464 68 COLOUR_TEXT_REGION 60 464 68 464 51 HELIX 20 464 23 COLOUR_TEXT_REGION 20 464 23 464 50 HELIX 39 464 43 COLOUR_TEXT_REGION 39 464 43 464 50 STRAND 3 469 7 COLOUR_TEXT_REGION 3 469 7 469 51 STRAND 21 469 23 COLOUR_TEXT_REGION 21 469 23 469 51 STRAND 26 469 27 COLOUR_TEXT_REGION 26 469 27 469 51 STRAND 35 469 36 COLOUR_TEXT_REGION 35 469 36 469 51 STRAND 50 469 53 COLOUR_TEXT_REGION 50 469 53 469 51 STRAND 60 469 68 COLOUR_TEXT_REGION 60 469 68 469 51 HELIX 37 469 42 COLOUR_TEXT_REGION 37 469 42 469 50 STRAND 2 470 8 COLOUR_TEXT_REGION 2 470 8 470 51 STRAND 34 470 41 COLOUR_TEXT_REGION 34 470 41 470 51 STRAND 60 470 69 COLOUR_TEXT_REGION 60 470 69 470 51 HELIX 19 470 28 COLOUR_TEXT_REGION 19 470 28 470 50 HELIX 42 470 52 COLOUR_TEXT_REGION 42 470 52 470 50