QUERY : SSMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNM : QUERY
UniRef90_W5UL63 : -STESRLQRLHGEIKISLKINNPDVKKCLVALDELSSLQLTTQHLQKHCELIATLKKIRRFKASQDVMDKATMLYNKFKTM : UniRef90_W5UL63
UniRef90_H3AI74 : TSVESRLQKLHGEIKISLRIEKLDVNKCIEALDELASLQVTMQHLQKHSELVTTLKKIRRFKASQAIMDKATMLYNKFKNM : UniRef90_H3AI74
UniRef90_W5MI61 : -SPEEKLQKLHTDIKFALKVDNPDVQRCLQALEELGSVQVTSQILQKNTDVVATLKKIRRYKASSEVMEKATQVYNKLK-- : UniRef90_W5MI61
UniRef90_UPI000457326F : -STEQKLQKLHTDIKHALKVDSPDIKKCVEALEDLRTLQVTTQLLQKHSDLVATLKKIRRYKASQEVMAKASEIYTHLKSM : UniRef90_UPI000457326F
UniRef90_F1QNR5 : -RKESTLQKLHGEIKTSLKIGNLDVRKCVHALDELSSLHVTTQHLQRHSELIATLKKICRFKSSQDVMDKAIMLYNKFKSM : UniRef90_F1QNR5
UniRef90_UPI0003C10CDA : PTIGERLQKLHSDIKHALKVDNPDIKKCLECLEELGGLQVTSHVLQKNTDLVATLKKIRRYKASKEVMDKATQVYNHLK-- : UniRef90_UPI0003C10CDA
UniRef90_UPI000333AED5 : TSMYFRLQRIHAEIKSALRIDHLNVNRCIAALDELAALQITMQQAQKHTQLITTLEKIQRFRVSQVIMEKSTALYNKFMNM : UniRef90_UPI000333AED5
UniRef90_H2LAP9 : TLTDSTLHRIHGDIWISLKNDSPDISKCLAALDQLSMLYVTSQHVQRHSELVATLRKMRYYRANQAIMDKASMLYNRFKN- : UniRef90_H2LAP9
UniRef90_K7EPS6 : PSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEK----------- : UniRef90_K7EPS6
UniRef90_S4R6A2 : -SMEQRLNKLHVEMKLSLSYANPDIVKCLQCMDELGSLKLTAQLLHKHQDLVATLKKARRYKANEDVMKKATLVYNNLKN- : UniRef90_S4R6A2
UniRef90_G3N5A5 : TLTDSTLHRIHGDIRISLKTDNPDIRKCLTALDQLSMVYVTCKHVQRHSELVSTLRKLRSYRANRAVMDKAAMLYSRFKN- : UniRef90_G3N5A5
UniRef90_T1IXA1 : -QVEVKLSEIDAALKESLNMSNPNHDRCIQVLSELDVLPVTAVMLKKNPDIVRTIKKCRYYRTNEIIKQKSEYLYNKFKSL : UniRef90_T1IXA1
UniRef90_UPI000258F779 : -RIEAQLLQLDAQIKSNLGLDRANPDKCLQAMDDMLLLPIDPLMLKKHPHIVETVKRLRRYIGNEQIRQKAEHIYNKFKAM : UniRef90_UPI000258F779
UniRef90_F1MRV5 : TSMDSPLQRIHAEINNSLKIDNLDVNRCTEALDELASLQITQCNKLKNTEMIMPFSKYGNSKL--VIMEKSTMLYNKFKNM : UniRef90_F1MRV5
UniRef90_H2XK36 : -QPQQQMEIYETKLKTALTVENPDITKALAILDQIDQIPITAALLKKCQSLVTTVKKIRRYKASQKIMDKSDKVYHRFK-- : UniRef90_H2XK36
UniRef90_H2KT04 : --TEARLLLIDRSIKSSLVRDHEDISTCVDRLEMLDRIQISLPVLAKCWIVVETIRKCRRYKRSMEVKIAAQKVFNKF--- : UniRef90_H2KT04
UniRef90_U6I0M0 : --TEARLHKIDIGIKTSLIRGQEDIPTCLQRLEALDKMELTLPVLVKCSVIVETIRKCSRYKPSMDVRIAALKVFNRFLKI : UniRef90_U6I0M0
UniRef90_UPI000440F685 : SVTDSLLYRLHGDIRISMTLDNPDVSKCLLALDELSNVPVSSRHIQNHSELIDTLRKMRWFRGSEDIMFKASMLYYRFKNI : UniRef90_UPI000440F685
UniRef90_G3HCB0 : -----------------------DVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNM : UniRef90_G3HCB0
UniRef90_F7FVJ4 : PSVEEKLQKLHGEIKFALKVDNPDVKRCLSALEELGSLQVTSQILQKNTDVVATLKKV----------------------- : UniRef90_F7FVJ4
UniRef90_G1RS81 : PSVEEKLQKLHSEIKFALKVDSPDVKRCLNAPTEIAPLHSSLELCSQEGLQASSLGQIRRYKANKDVMEKAAEVYTRLKS- : UniRef90_G1RS81
UniRef90_V5IIL7 : -----RISELDKDIKNSLGVSKMDVDAALKALDEVDKLPLTQSLLRKEQEILYTVKKCSKFTGDDRIKKKAEYLYHKFKNI : UniRef90_V5IIL7
UniRef90_B0W6Z5 : --LERELVELNLEIKSCVGLAKADPEKCVELMEQYQQLKVTPTMLKKNPNCVETMKRLRKYVGNQQIRTKAEQIYNQFKTM : UniRef90_B0W6Z5
UniRef90_K1QHV3 : -QTEGKLSAMDKEIKLCVQRDSTDVDKCLAIMEDLDALPVNQVMLKKNPDIMKTIKQLRKYKGSEKIRLKAEVIYHKFK-- : UniRef90_K1QHV3
UniRef90_UPI000203B0F3 : ----------------------EDIKRCLNALEELGSLQVTSQILQKHTDVVATLKKIRRYKANKDVMEKAAEVYTCLKS- : UniRef90_UPI000203B0F3
UniRef90_G3MH66 : TQVEKRVCELDRDIKNSLGINTRDVGAALQAFDELDKLPLTHSLLLREQDIIHTVKKCTKFTGDDRIKKKAEYLLNKFKNM : UniRef90_G3MH66
UniRef90_K7ILU0 : -RTEAHITFLDTQIRSSLGLEQANVEECLEAMDQMLELQITPLMLKKHSHIVEAIKRLRRYVGNDEIKKKAEKIYIKFKSL : UniRef90_K7ILU0
UniRef90_W5J3K4 : --LERELVELNLEIKSTVKLASADAERCVRLLDQYQKLKITPTMLKKNPNCVETIKRLRKYVGNQQIRNKADLIYNQFINM : UniRef90_W5J3K4
UniRef90_UPI0004432960 : TSMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKV----------------------- : UniRef90_UPI0004432960
UniRef90_W4ZL43 : -ETEEKIENFHVNLKQSLALDNPEPARSLQIMANIDQIRLTPSLLKKHVDFVQTIKKVRKFKSSDAVRKKAEYLYNKLK-- : UniRef90_W4ZL43
UniRef90_Q7Q3S2 : --LERQLVELNLDIKSSVKLNCADPERCVKLMEQYENLSVTSTILKKNPNCVETMKRLRKYVGNQQIRNKAEQIYSRFK-- : UniRef90_Q7Q3S2
UniRef90_D6WPL1 : -RAESSLVELDAKIKNCLGLNKAEPKKALEFLDSLLEINMDEIMLKKHSHVVEMIRRLRKYVGNQKVRTKADEIYKKFKSV : UniRef90_D6WPL1
UniRef90_U5ET94 : -TLESKLIELNQLIKASVGLSSANVEKCVELLDDYKKLKITQLMLKKHPNCVETMKRLRRYVGNEQVRNKADEIYNGFKKL : UniRef90_U5ET94
UniRef90_UPI000298EB07 : ------------NIRISLKTDKPDIDKCLTALDQLGLVYVTSKHVQRHSELVVTLRKLRSYRASRSVMEKASMLYNRFKH- : UniRef90_UPI000298EB07
UniRef90_U6IJZ0 : --TEAKLHQCYLGIKKSLIRGQENLSACIQRMEIVEKLPITLPILVKCFPIIETIKKCTRYTRSDGVKIGALRLHNKFLSI : UniRef90_U6IJZ0
UniRef90_G7YIK0 : -----QLCQHCRELKASLIRGHENFAVAVQHLTQLATIQARLPQLAQVWDLMDCIKKCRRYKLSEEVRNAAQKTFSAFQSI : UniRef90_G7YIK0
UniRef90_V5I9K1 : --IESELMCFDSKIKKCLGLDKADPQQAICYLESIYNTNFDDLMLIKHPHVVEMVRRLRKYVGNEKVRAKAEQVYSKFKTV : UniRef90_V5I9K1
UniRef90_UPI0002ADAAEC : PSVEEKLQKLHSEIKFALKVDSPDVKRCLNA----SSLG----------------GQIRRYKANKDVMEKAAEVYTRLKS- : UniRef90_UPI0002ADAAEC
UniRef90_T1IAJ2 : -QIEGHLLDIDIHFRRSLNIVNPDFDACFILLDHLVALPITPLMLKKQPHIVAHIDQARSYVGSIEPMLNSDSIQKKFK-- : UniRef90_T1IAJ2
UniRef90_C3Z0T2 : -----HVKKLQAALVLSLQLTAPDIPRSLEVLEELNSLPLTAAMLKRNIDILRTIKRVRKYKGSEDVQKKAEFLYRSTK-- : UniRef90_C3Z0T2
UniRef90_S4P907 : --VEMKLIELDAKIKTCLCLEKADTELCLKLLDELMALDIKPLMLLKHPTTPETIKRMRAYVGNTELTENAALLFSQ---- : UniRef90_S4P907
UniRef90_H9JJG7 : --TEMKLIELDAKIKTCLCLEKADTELCLKLLDEFMELEVKPLMLLKHPTCLETVKRMRAYVGN----------------- : UniRef90_H9JJG7
UniRef90_T2MA44 : -TVAEHLQKLEIELRKNLSVKSTDHIKSLKVLQEISDLNLTASILMKNKTIVTTLKKIKAYKANQQVSEKATELYSHFKSL : UniRef90_T2MA44
UniRef90_I1GHR2 : ------LQAYNYNLKVSLIVGSAEPQKALKNLRGLMDYHFSASDIVQVKDLVVTLRKVRRYKGNSRVRSKANEVYNKIK-- : UniRef90_I1GHR2
UniRef90_UPI000273D281 : -SMDPQLQRIHAYMKNSLRIGSPDGNRYIEA-----TIQATSSKSQTDYENTKEI----QVKVSQVLMKKTSYACSNFKNV : UniRef90_UPI000273D281
UniRef90_E9HNH6 : --TESRLVELDYRIKESISVNRPNCVAAITALDELYSLQMAPLMLKKHPFIVTTILKLKRYIGPKESSEHTEE-------- : UniRef90_E9HNH6
UniRef90_W5J6B8 : ---ERELVECVLEIKSTVKLAGANAVRCVELLVQFQDLKITPTMLKKNPNCIEVIKELRFYVGNKQIRDKAEKIYSQFPSM : UniRef90_W5J6B8
UniRef90_E0VF72 : --LETRLVDIDVLIKTSLQKAKVDVDKALSLMDELINMPLDPLMLKKHPQVVDTTKKLRQYVGNHKIRQKANILFNKY--- : UniRef90_E0VF72
UniRef90_UPI0003F090D0 : TELEAMLEEHHMTVKQSLAMENQDFDRCIKALADIDCMELSGAMFKKNTDFLQTLKKIKKYKGNKRVREKADYLYNKIKHI : UniRef90_UPI0003F090D0
UniRef90_T1IG84 : -RIECKMLKLDLRIKRCLNLVEPNLQNCLQFLTQLDTLQITPVMLKKHPEVVNTISRVKLYRQASEIRAKADGVYHKIKTL : UniRef90_T1IG84
UniRef90_T1P8L8 : --IERDFIQLSAQLRECLGLKRADVDRCLKIIKQYKEFQLTKIMLLRNPDCVDSIRRMRRYIGNEIIRSEAVLIYNNFKKI : UniRef90_T1P8L8
UniRef90_F6QW07 : -SMDSQLQRIRAYMKTSLKIGSLDGNRYIEA---------TIATSSKSQRDYGNTKKIQQVKVGQVLMKESTICCSNFKNV : UniRef90_F6QW07
UniRef90_W8BCM7 : --IERDFIQMSQQLRESLGLKSADVERCVDLLKQYKDFELTQLMLLRNPDCVDIIRRLRRYVGNEIIRNEAVYIYNYFKKL : UniRef90_W8BCM7
UniRef90_UPI00026573EE : ------LEMTDASIRANMGVERMDPGKAFEAIVALENKFITAPAIKRFPKLLSTLRLVRRYPKDERLAKKADYMYNKIKH- : UniRef90_UPI00026573EE
UniRef90_A9UTQ2 : --VEHQMKAFAKELMTSLPKDSPNIPGALAALDKLDALNCKASTLMQQADIIKVVKQVGKH-SNEKVSAKAKALCHKWKDM : UniRef90_A9UTQ2
UniRef90_U4U3C5 : ----------DSKIKNNLGLDKAFPEKALSALGEFRTFEVETLMFKKHPHVLDTIRRLRKYVGNEKIRNEAEKIYNKVKNL : UniRef90_U4U3C5
UniRef90_L8YAR7 : TSMDSRLQRIHAEIKNSLKIDNL----------------------------------IRRFKVSQVIMEKSTMLYNKFKNM : UniRef90_L8YAR7
UniRef90_W6UEF6 : -----KLQILHIQLKSNLVRGHEKFDAAVDVLARICATKVSLLQLTKVWELTDCVKKCRKYRLSAQVRDAASRALAYFQRI : UniRef90_W6UEF6
UniRef90_UPI0003C1247F : TSVESRLQKLHGEIKISLRIEKL----------------------------------IRRFKASQAIMDKATMLYNKFKNM : UniRef90_UPI0003C1247F
UniRef90_J9KAX9 : --TEVDLLDYIHKLRMALRTDHADYEVALELLEHIIELQVNALMLKKHQEIVETIKALTRYTGNAKIRRKAEVIFNKFISL : UniRef90_J9KAX9
UniRef90_B4NJK1 : --MERDFIQLSQQLRECLGLRRANVGKCLEILEEFNQVGLTKLMLLRNPECVDIMRRLRRYVGNQIIRKVSSEIYEGFKKL : UniRef90_B4NJK1
UniRef90_G4V717 : -----QLNQCCRDLKTSLIKGHENFVEAVQLLNKVRSIPVRLPQLAEAWDLMDCIKKCRRYKLSSEVREAAQTTFQFFQSL : UniRef90_G4V717
UniRef90_B4JES2 : --MERDFIQLSQQLRECLGLRRANVGRCLEILQQLKDVELNKLMLLRNPECVDIMRRLRRYVGNLDIREVSTGIYDTFKTL : UniRef90_B4JES2
UniRef90_G6DTK8 : --TEMKLIELDAKIKTCLCLEKADTELCLKLLDELMELELKPLMLLKHPSCLETIKRMRAYVGNTKIRRQADVLYNNMKEL : UniRef90_G6DTK8
UniRef90_T1I253 : --MEGHLLDIDLHLRRSLNTMDPDFDACFLLFDHLINLPIMAIMLKKHPHIVAYIDELRCYVKSEIVRLKSEMAMAKF--- : UniRef90_T1I253
UniRef90_C3Z0T4 : ---ERALMELHSDLVSALQVGHIDVPAAVSVLKKMRDIVFTQRLLTKQPKIVYTLHKVREFAGSRQVQKLAGRLY------ : UniRef90_C3Z0T4
UniRef90_B5DJG2 : -TIERDFSDLCAKIRQCLPVRQAHVTKCLKNLGRLKKLELTKVMLLRHPESVDTLRKLQGYVGNKIIRQEATIIYARF--- : UniRef90_B5DJG2
UniRef90_U6IIJ6 : ----QHLRNLVFKLKSSLLRGRENYGAAVNVLECIRATPVTLLQLTEVWELTDCVKKCKKYRPSEEVRIAASKTIAYFQEI : UniRef90_U6IIJ6
UniRef90_R7UAM6 : -RIEMDLVRLNAELKECMRIGKVDVEKCLDCLEELLDLNPSPLMLTKYPDVMITVAKVMLYEEDECIMRKADKVNDHFQVM : UniRef90_R7UAM6
UniRef90_UPI00035947AB : ----QELMRIESDLSNCLDDDDNDTETMMTILEDLDTLPINPRLLSAFPQVIDTLEKCDSDRQNGDARKLSQMICSRYKNL : UniRef90_UPI00035947AB
UniRef90_B4MVH7 : ------------QLRDCLGFRGANVGKCLKILTDLKNIHISKLLLLRNPECVSVIRRVQKYQGNLKIRKLSVEIYNSF--- : UniRef90_B4MVH7
UniRef90_F2USA4 : ----ERLGQLVSELKRCLSKGDKDVSGAVSRLKEIDALPLSQRTITENTDHVVSIRMLRKFP-DQAVSSHAKAIIAKWKTM : UniRef90_F2USA4
UniRef90_S2KC86 : --------------KTSLTLERENIQTCLEILESLGKIKVTGELLKK-TDIGKTIGKLRTHK-DAKLAIKAKSIVKKWKD- : UniRef90_S2KC86
UniRef90_F7FZ86 : --------------KNLLKIDGLDGHRYIE-----TTMQATSSESQRDYENTKEI----QVKLSQVLMKNMKKIYNNFKNI : UniRef90_F7FZ86
UniRef90_J9JRV5 : -RTEVNLLDCVNKLSSALSINKLSYEMALKSLEEISELQFNALMLKKHRCIIDKITKVTKYVGDHQIRCKARKVLNKCKSL : UniRef90_J9JRV5
: 1---------11--------21--------31--------41--------51--------61--------71-------- :
OrigSeq : SSMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNM : OrigSeq
Jnet : --HHHHHHHHHHHHHHH-------HHHHHHHHHHHH-----HHHH----HHHHHHHHHH-----HHHHHHHHHHHHHH--- : Jnet
jhmm : --HHHHHHHHHHHHHHH-------HHHHHHHHHHHH-----HHHH----HHHHHHHHHH-----HHHHHHHHHHHHHHH-- : jhmm
jpssm : --HHHHHHHHHHHHHHHH------HHHHHHHHHHH------HHHH----HHHHHHHHHH-----HHHHHHHHHHHHHH--- : jpssm
Lupas 14 : ----------------------------------cccccccccccccc--------------------------------- : Lupas 14
Lupas 21 : ---------------------------ccccccccccccccccccccc--------------------------------- : Lupas 21
Lupas 28 : --------------------------------------------------------------------------------- : Lupas 28
Jnet_25 : --B---B--BB--BB-BB-B----B--BB-BB--B--B-B-B-BB--B--BB-BB--B--B-----B--BB--BB--B--- : Jnet_25
Jnet_5 : ------B------B---B---------BB-BB--B---------B---------B--B--------B---B--B------- : Jnet_5
Jnet_0 : -------------B-------------B------------------------------------------B--B------- : Jnet_0
Jnet Rel : 981899999999999860158874689999998751687635554135568999998733787568999999999861299 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.