SILENT_MODE BLOCK_FILE jp_ZDLuQIM.concise.blc MAX_NSEQ 913 MAX_INPUT_LEN 915 OUTPUT_FILE jp_ZDLuQIM.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 223 902 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 903 223 912 H SPACE SUB_CHARS 1 903 223 912 E SPACE SUB_CHARS 1 903 223 912 - SPACE STRAND 6 906 7 COLOUR_TEXT_REGION 6 906 7 906 51 STRAND 16 906 22 COLOUR_TEXT_REGION 16 906 22 906 51 STRAND 27 906 30 COLOUR_TEXT_REGION 27 906 30 906 51 STRAND 47 906 52 COLOUR_TEXT_REGION 47 906 52 906 51 STRAND 87 906 89 COLOUR_TEXT_REGION 87 906 89 906 51 STRAND 93 906 98 COLOUR_TEXT_REGION 93 906 98 906 51 STRAND 111 906 117 COLOUR_TEXT_REGION 111 906 117 906 51 STRAND 122 906 127 COLOUR_TEXT_REGION 122 906 127 906 51 HELIX 35 906 40 COLOUR_TEXT_REGION 35 906 40 906 50 HELIX 57 906 67 COLOUR_TEXT_REGION 57 906 67 906 50 HELIX 72 906 79 COLOUR_TEXT_REGION 72 906 79 906 50 HELIX 133 906 142 COLOUR_TEXT_REGION 133 906 142 906 50 HELIX 152 906 216 COLOUR_TEXT_REGION 152 906 216 906 50 STRAND 5 911 7 COLOUR_TEXT_REGION 5 911 7 911 51 STRAND 16 911 22 COLOUR_TEXT_REGION 16 911 22 911 51 STRAND 27 911 29 COLOUR_TEXT_REGION 27 911 29 911 51 STRAND 47 911 51 COLOUR_TEXT_REGION 47 911 51 911 51 STRAND 87 911 89 COLOUR_TEXT_REGION 87 911 89 911 51 STRAND 93 911 99 COLOUR_TEXT_REGION 93 911 99 911 51 STRAND 111 911 117 COLOUR_TEXT_REGION 111 911 117 911 51 STRAND 121 911 127 COLOUR_TEXT_REGION 121 911 127 911 51 HELIX 35 911 40 COLOUR_TEXT_REGION 35 911 40 911 50 HELIX 58 911 67 COLOUR_TEXT_REGION 58 911 67 911 50 HELIX 73 911 79 COLOUR_TEXT_REGION 73 911 79 911 50 HELIX 133 911 142 COLOUR_TEXT_REGION 133 911 142 911 50 HELIX 152 911 165 COLOUR_TEXT_REGION 152 911 165 911 50 HELIX 167 911 216 COLOUR_TEXT_REGION 167 911 216 911 50 STRAND 7 912 7 COLOUR_TEXT_REGION 7 912 7 912 51 STRAND 16 912 22 COLOUR_TEXT_REGION 16 912 22 912 51 STRAND 27 912 30 COLOUR_TEXT_REGION 27 912 30 912 51 STRAND 47 912 52 COLOUR_TEXT_REGION 47 912 52 912 51 STRAND 87 912 89 COLOUR_TEXT_REGION 87 912 89 912 51 STRAND 94 912 97 COLOUR_TEXT_REGION 94 912 97 912 51 STRAND 111 912 117 COLOUR_TEXT_REGION 111 912 117 912 51 STRAND 122 912 126 COLOUR_TEXT_REGION 122 912 126 912 51 HELIX 35 912 39 COLOUR_TEXT_REGION 35 912 39 912 50 HELIX 57 912 67 COLOUR_TEXT_REGION 57 912 67 912 50 HELIX 72 912 79 COLOUR_TEXT_REGION 72 912 79 912 50 HELIX 134 912 142 COLOUR_TEXT_REGION 134 912 142 912 50 HELIX 152 912 215 COLOUR_TEXT_REGION 152 912 215 912 50