QUERY : NAKQIVHELYNDISISKDPKYSDILEVLQKVYLKLEPSPLINRLVNYLYFTAYTNKIRFTEYQEELIRNLSEIGRTAGINGLYRADYGDKSQF : QUERY
UniRef90_UPI0002EC19AB : NAKQYIDDLYNQLIVRKDQELRDITDVLLQSYKKMDPEALVNRLVNYIRSQALKAKIHFPSDQENLVIELETIGQRAGLNGVYMADYSDKSQF : UniRef90_UPI0002EC19AB
UniRef90_E1TS19 : QAQEAIKGLIVRLSGWSDQDLLDIIDVLMQVDKKINPEALVNRLVNYIRSVAIKGRLHFPDEEEKLMIDLGIIGQKAGLNGAYMADFSDKSQF : UniRef90_E1TS19
UniRef90_R2S100 : -AKMEIHELYNLLSQRQPPELLDITDVLLQVYKRMEDEALLNRLVNYIRNAALKGKLHFSKKEEALIIQLGVHGQKAGLNGIYQGDYSDKTQF : UniRef90_R2S100
UniRef90_R2NXN2 : QAQQLIHDLYNRLIKRENPTVTDITDVLLQVYRKLDPAALVNRLVNYIYRVGFDNKVHFDKAEEQLIIDLGTISNRAGFNGVYRSDAGNKAQF : UniRef90_R2NXN2
UniRef90_L2S264 : HTKKVIHELYNSLMTRPNQTLLDITDVLFQVYKKIDPEILVNKLVNYIYIVGFDNKIRFIDNDEKLLIELGDISKKAGINSKYKANFTDKSQF : UniRef90_L2S264
UniRef90_B2LS02 : -SKNNIEALLHLLEKRKSSELLDIIDVLSQVYSKIDPEALINRLVQYIRSVGIKGRLHFPKNEERLIIDLGSIGQKAGLNGLYMADFSDKSQF : UniRef90_B2LS02
UniRef90_W7B3G7 : -SKELIHDLYNKLSKRSDPELLDILDVLYQVYLKIDPEAYVQRLVNYIYSVGLKGRLYFPEDENRLIAELGIIGQKAGLNGLYKANYGDKSQF : UniRef90_W7B3G7
UniRef90_K0Z688 : NERTTIHALYNCLCERKEQELLDIEDVLLQVYKKIDPEALINRLVQYIRSISLKGRLHYSSKEENLIIQLGEFGKKAGLNGLYRGDFSDKSQF : UniRef90_K0Z688
UniRef90_S0S315 : -ALKDIVDLYSLLRERKDPEMLDITDVLLEVSKKLNPEALINRLVQYIRSTAIKGKIYFPPEEEKIVISLSAIGKKAGLNGLYMADFSDKTQF : UniRef90_S0S315
UniRef90_A0A023CYE8 : -TRKDIQELFELLKKRTDQELLDISDVLAQVYVKLDPEALVNRLVNYIRSVAIEGRIHFPHEEESLMIDLGVIGQKAGLNGSYMSDYSDKSQF : UniRef90_A0A023CYE8
UniRef90_UPI0004686D14 : -TKCYVKELYGLLLNRDNQELLDITDVLLQVYKKIDPEALVNRLVNYIRVVASTGHVYFPTDQEKLLIELSVIGQKAGLNGLCMADFSDKSQF : UniRef90_UPI0004686D14
UniRef90_K8ETM9 : -VKENIHELYNNLIKRSGSSLLDITDVLLQVYIKIDPEALVNRLVNYIYSVGLKGRIKLSPVEENLLSELGVFAQRAGLNGLYRAGFSDKSQF : UniRef90_K8ETM9
UniRef90_H7CS41 : -SKDLVHSLYNSLSKSKENNFDDIKEVLLKVYTKLDLCPLINRLVNYIYFTAYTQKLTFSSNEENIIRELSEIGKYAGLNGVYRSDYGDKSQF : UniRef90_H7CS41
UniRef90_UPI0002195248 : HVKEVIHELYNSLAERPEQSLLDILDVLAQVYKKIDPEYLVDRLVKYIYAVGFNNKIRFLGQDGKLLVELSDVAKKAGLNSRYRADYSDKSQF : UniRef90_UPI0002195248
UniRef90_Q9ZEG4 : -SKQVVHELYNSLDQ---SDMEDIKEVLLKVYKKLEDSPLINRLVNFIYFTAFNQKLHFNEEQESMIRKLSEIGQTAGLNGVYRSSYGDKTQF : UniRef90_Q9ZEG4
UniRef90_UPI0003B58EF5 : -AQKIIHDLFNDLEKSKDSSFKDIQDVLMKVYQKLDDPPLVNRLVNYISFTAVTKKLKFSSMQNEWIMELSTIGRKAGLNGVYRSDYGDKNQF : UniRef90_UPI0003B58EF5
UniRef90_E6LI20 : QAKQEIIKLVTQLQERKQPELLDIIDVLHQVHATLDPEVLINHMVNYIRSMAIKGRLHFPAEEEKSMMALGVIGQQAGWNSQYMANFSDKSQF : UniRef90_E6LI20
UniRef90_I7LMI2 : -AKHNIELLYLSLQSKLVPGIRDITDVLLQVNKQIDPEALINRMVNYIRITASSEKLHFSKADEKLIIDLGVIGQQAGLNGQYMADFSDKSQF : UniRef90_I7LMI2
UniRef90_H7G1A1 : -TKEVIHELYNSLMDRPQKGLLDITDVLLQVYKKLDPEYLINKLVNYIYSVGFDQKIRFMGRDGELLRKLADESNKAGLNSRYRADYSAKSQF : UniRef90_H7G1A1
UniRef90_Q93FV6 : -AEQYVTELYKKLKSRKTSGLLDILDVLIQVQKNLNPEALVNRCVQYIRSVAIKDKLYFPPAEENIIINLEVIGQKAGWNGSYMADFSDKSQF : UniRef90_Q93FV6
UniRef90_UPI00046A41A1 : -TKKVIHELYNALHAHPDPYLLNITDVLSQVYMKLDPEAWLSRLVNYIYMEAF-GRVHFSREEDILLIELGDLSKRSGLNGRNRANFNDKSQF : UniRef90_UPI00046A41A1
UniRef90_R6TLX3 : -----------------STELLDILDVLAQVYRKLNPEAVLNRLVNYIRSVALAGRIHFPKKEEALIIDLGVLGQRAGLNGVYMADFSDKSQF : UniRef90_R6TLX3
UniRef90_R9GCP6 : -AKENIHTLYNSLMAHPDKSLLDITDVLSQVYLTLNPEALVNRLSNYIYSVGF-GKIHLNKSEEQLLIDLGAYGQRAGWNSVYRGDYTAKAEF : UniRef90_R9GCP6
UniRef90_P34035 : -AKIYTNKLYLLLIDRKDAGYGDICDVLFQVSKKLDSEALINRLVNYIRITASTNRIKFSKDEEAVIIELGVIGQKAGLNGQYMADFSDKSQF : UniRef90_P34035
UniRef90_UPI000371E8A9 : --KKHIHQLYNSLMKKENKNLLDICDVLLRCYQIVDPERLINRLVNYIYVLGHDNHIGFYDDDAVSLRYLANVGKRAGINGVYRANITDKSQF : UniRef90_UPI000371E8A9
UniRef90_R2Q6B8 : --QQTVHELFNSLSKSDSTEYQEILEVLQKVYLRLQKEALANRLANFIYFKAYTEKIHFTKDQDKMIQKISSIGKYAGLNGSYRADYGDKSQF : UniRef90_R2Q6B8
UniRef90_S0KUB1 : -VQLVLHELYNSLNSRKEQGIQDITDCLLQVYKKINPESLLSALVNYIYVTGFNHKIQFHGRDEELLRELAKYNQTAGLNAKYRSDFTDKSQF : UniRef90_S0KUB1
UniRef90_UPI00021934D3 : QAKQTIHELYNSLGSNKAPEIADIRAALLKVYNKTDQEPLYSRLVNLIYSTGTVGYLGLTKEQERLIRDLAEIGKRAGPAGGAFMAYGNKDSF : UniRef90_UPI00021934D3
UniRef90_S1RKJ7 : -VKEKVHELYNLLIAHQATSWLDITDCLLQVYKKIDPPVFISKLVNYIYLTAVDARLHFTPQEEGLINELNHYANEAGINRQYRANAVDKSQF : UniRef90_S1RKJ7
UniRef90_UPI00029A4CF9 : -SQEYIDRLIAILDNRKSAKLNDIIDVLRQVSKKLNPEALVMRLINYIRSVSMAGRLHYSKEEENLIINLEMIGQKVGLNGQYMADFGDKSQF : UniRef90_UPI00029A4CF9
UniRef90_UPI00046A8787 : -VKELIHGLYNYLIKVPNPGLLNITDVLLQVYTKIDDDPLISRLVNYIYVEGFDN-VTLPKKQDNQLIELANMAKRAGWNGRNRANFTDKSQF : UniRef90_UPI00046A8787
UniRef90_S0NVF8 : -AQTIVHALYNDLAQDSRTDVEAIKEVLLKVYPKLDDPRLVSRLTNFIYFTAFNEKLTFSPSQQEFIAQLNVISQKAGINNPYRTAIGSKEQF : UniRef90_S0NVF8
UniRef90_X0PDQ6 : -----------------SPELMDITDVLQQVYHTLDPEALVNKLTKYIYISGFK-KITFAPAENKLLANLGAIGQRAGLNGAYGSDYSDKSQF : UniRef90_X0PDQ6
UniRef90_R2T9M2 : -SKQLVHALYNSLGSNHEENYVELKEVLMKVYKKLDDDLVMSRLVNYIYFKNLTQKLKFTEEQNQIITKMNEIAKTAGVNNAYKGYLGSVSQF : UniRef90_R2T9M2
UniRef90_W6TBU2 : -AKGIVRALYDDLSQAPVAGTADIMEVLGKVMQRLNDPKIINRLAGYIAFTVFTNKIRFTKTQNLLVSQL----MSAADNGLYQGNYGDKSWF : UniRef90_W6TBU2
UniRef90_S0RYJ0 : STKKIVYQLYNHLIARKNKGLRDITDVLLQVYTEIDPELLENRLVNYILIVAVDNHVLFDTYEKKRILELENIAKNLGATINYQAGCVSKAQF : UniRef90_S0RYJ0
UniRef90_W7CS28 : GSKQLVHELYNSL---EQPDMKEVKDALLKVYAKLKDEALIGPLVKFIYFTAFAQKLHFNEEQNKLIGKLSDIGKTAHPEGLLR--------- : UniRef90_W7CS28
UniRef90_Q1WVJ1 : --QRLVVELYDSFENDNRKGVEEIRQVLANVNEKYHPLAWTGRLVLYLQVNAVKKDLYLTSEQKDIIKELARIGKRTNLNYVYLSPVDDAKQF : UniRef90_Q1WVJ1
UniRef90_V7ZMH9 : ---------------DKTKAILDITHVLLQVYKKIDPEILINKMVNYIYIVGFDNKIHFLGNDEKLLIELGDISKKAGI-------------- : UniRef90_V7ZMH9
UniRef90_UPI00046A343A : NAKSLISALNDLIINREDSELRDISDVLVQVNKTIDPERLLSKLTTFIYSMGPAGKIYFPKKEEQLIDKIAVIAQKSGNTGLYYSSFNTKS-- : UniRef90_UPI00046A343A
UniRef90_I7JV57 : --------LYHTFDGRPGNEYSKLQDVLDKIDQNDHPYAYTNKLVMFIEARHALRGLYLSPDQNKLLIDLRENTKRTNLNYVYLSAIDATSQF : UniRef90_I7JV57
UniRef90_UPI00046AFFF5 : -------DMYNELNIHR---YRQIRDTIGLVMRKFDPLAYTSKLVMYIQSQVAINHLPLTRQQQEYMRELTNQTKYVNLNYVYSGPVNDAKQF : UniRef90_UPI00046AFFF5
UniRef90_A0A038AK70 : ------------------------MQVYEKIDSEKYPEILINKMVNYIYIVGFDNKIHLLENDEKLLIELEDIPKKAGINSKYKANY------ : UniRef90_A0A038AK70
UniRef90_UPI00021916FE : --------------------INELLLVAQRVATRMERGRWANRLVAYIDFSVFNRTFTLPDGAAPYVAQLREIGKLAGVNGAYRTDYGSAAQF : UniRef90_UPI00021916FE
UniRef90_F0NVD1 : --KKVYQELYNSFSSDIYNEYRPIRDAIGLVINKFDPMEYTSKLLMYIEATVALNHLHLTPEQEDLMRKLTELTKYVNLSYVYLSPIDSEKQF : UniRef90_F0NVD1
UniRef90_F6CBM0 : -------DIYNEMNIGR---YRPIRDAIGLVMNKFDPLEYTSKLVMYIQARVAMNHLHLTCEQENLMKKLTEATKYVNLSYVYLSPLDSEKQF : UniRef90_F6CBM0
UniRef90_R4JWA2 : -------DIYNEMNIDR---YRQIRDVIGLVINKFDPLEYTSKLVMYIQARVAMSHLHLTDEQVKIMRKLTESTKYINLSYVYLSPIDSAEQF : UniRef90_R4JWA2
UniRef90_N1ZZ15 : ---------YNELNIDK---YRQIRDAIGLVMRKFDPLEYTSKLVMYIQARVVLKHLRLSSVQQKIMQTLSEQTKYINLSYVYTCPLDDVTQF : UniRef90_N1ZZ15
UniRef90_C2ELU2 : ---QDLKKFYNSFFSNIYNEYRQIRDAIGLVMNKFDPLEYTSKLVMYIQARIALRHLRLTDEQQDLMKKLTQATKYVNLSYVYLSPIDSEKQF : UniRef90_C2ELU2
UniRef90_F4AG31 : ----VLKDLYTSFNKVQIKAYLPLEQTILKVIAKDDAAAWSNKLVMYLQSQIVLKQIPITKEQDTLINSLSEQCKNTNLNYVYLSPVDDSLQF : UniRef90_F4AG31
UniRef90_F0NX52 : --------MYNELNINK---YKTIRDAAGLVMRKDHPLAYTSKLVMYIQSQIALKHLSLTNQQQKILKELQKRSQYVNLNYVYTSLLNDIKQF : UniRef90_F0NX52
UniRef90_R2QA85 : -AKKLVHELYNTIGDKQGKSYLELKEVLLKVYKKLDKETLISRLINYIYF------------------------------------------- : UniRef90_R2QA85
UniRef90_R4E7K7 : NAKQIVHELYNDISISKDPKYSDILEVLQKVYLKLDPSPLINRLIK----------------------------------------------- : UniRef90_R4E7K7
UniRef90_I7LEQ8 : -------DMYNELNIDPYRPLRDIANVLYKFTIDDHPMAYTGKLVMYIESKLVLEDLHLTNEQREILNQLRQLTKNINLSFVYQSPLTSFDQF : UniRef90_I7LEQ8
UniRef90_J4BRN0 : ---------------------------------------------MYIEVKVALNHLHLTPDQEKIMKNLTEKTKYVNISYVYLSPIDSAEQF : UniRef90_J4BRN0
UniRef90_I7KPS1 : -------DVYNELNIHR---YLPVRDAIANVIHKFHPMAFAGKLVMYIQTQIAFSHLRLSKQQLLLLHRLEDLTKNIDLTFVYTSPLDSNQQF : UniRef90_I7KPS1
UniRef90_I9KY88 : -AQGIIQDLYQELA--PTAVNEGIRAELCKAHQQLQDENLLKKLTNYITYTIFTQQLRLTPTQNLLVSELLSISHR----------------- : UniRef90_I9KY88
: 1---------11--------21--------31--------41--------51--------61--------71--------81--------91- :
OrigSeq : NAKQIVHELYNDISISKDPKYSDILEVLQKVYLKLEPSPLINRLVNYLYFTAYTNKIRFTEYQEELIRNLSEIGRTAGINGLYRADYGDKSQF : OrigSeq
Jnet : --HHHHHHHHHHHH------HHHHHHHHHHHHH----HHHHHHHHHHEEEEEE---E---HHHHHHHHHHHHHHHH----------------- : Jnet
jhmm : -HHHHHHHHHHHHH------HHHHHHHHHHHHH----HHHHHHHHHHHEEEE----EE--HHHHHHHHHHHHHHHH----------------- : jhmm
jpssm : --HHHHHHHHHHHH------HHHHHHHHHHHHHH---HHHHHHHHHEEEEEEEE-EE---HHHHHHHHHHHHHHHHH---------------- : jpssm
Lupas 14 : --------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21 : --------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28 : --------------------------------------------------------------------------------------------- : Lupas 28
Jnet_25 : ----BB--BB--B-------B--BB-BBB-BB--B----BBB-BBBBBBB-BB---B-B---B--BB--B--BB--BBBBB-BBB-B------ : Jnet_25
Jnet_5 : -----B--B---B----------B--BB--B--------B---BB-BB--------B---------B--B---B------B-B---------- : Jnet_5
Jnet_0 : ---------------------------B--B------------B------------------------------------------------- : Jnet_0
Jnet Rel : 935899999998615888747899999999873147646666543022789833103175689999999999998613677645667777899 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.