SILENT_MODE BLOCK_FILE jp_i6jfKj6.concise.blc MAX_NSEQ 906 MAX_INPUT_LEN 908 OUTPUT_FILE jp_i6jfKj6.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 197 895 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 896 197 905 H SPACE SUB_CHARS 1 896 197 905 E SPACE SUB_CHARS 1 896 197 905 - SPACE STRAND 2 899 7 COLOUR_TEXT_REGION 2 899 7 899 51 STRAND 26 899 31 COLOUR_TEXT_REGION 26 899 31 899 51 STRAND 50 899 52 COLOUR_TEXT_REGION 50 899 52 899 51 STRAND 73 899 76 COLOUR_TEXT_REGION 73 899 76 899 51 STRAND 94 899 98 COLOUR_TEXT_REGION 94 899 98 899 51 STRAND 121 899 121 COLOUR_TEXT_REGION 121 899 121 899 51 STRAND 124 899 130 COLOUR_TEXT_REGION 124 899 130 899 51 STRAND 139 899 144 COLOUR_TEXT_REGION 139 899 144 899 51 STRAND 182 899 183 COLOUR_TEXT_REGION 182 899 183 899 51 STRAND 191 899 191 COLOUR_TEXT_REGION 191 899 191 899 51 HELIX 12 899 21 COLOUR_TEXT_REGION 12 899 21 899 50 HELIX 39 899 45 COLOUR_TEXT_REGION 39 899 45 899 50 HELIX 58 899 67 COLOUR_TEXT_REGION 58 899 67 899 50 HELIX 86 899 86 COLOUR_TEXT_REGION 86 899 86 899 50 HELIX 111 899 115 COLOUR_TEXT_REGION 111 899 115 899 50 HELIX 152 899 175 COLOUR_TEXT_REGION 152 899 175 899 50 STRAND 2 904 7 COLOUR_TEXT_REGION 2 904 7 904 51 STRAND 26 904 31 COLOUR_TEXT_REGION 26 904 31 904 51 STRAND 50 904 52 COLOUR_TEXT_REGION 50 904 52 904 51 STRAND 72 904 77 COLOUR_TEXT_REGION 72 904 77 904 51 STRAND 95 904 97 COLOUR_TEXT_REGION 95 904 97 904 51 STRAND 124 904 129 COLOUR_TEXT_REGION 124 904 129 904 51 STRAND 139 904 144 COLOUR_TEXT_REGION 139 904 144 904 51 HELIX 12 904 21 COLOUR_TEXT_REGION 12 904 21 904 50 HELIX 39 904 45 COLOUR_TEXT_REGION 39 904 45 904 50 HELIX 58 904 67 COLOUR_TEXT_REGION 58 904 67 904 50 HELIX 84 904 88 COLOUR_TEXT_REGION 84 904 88 904 50 HELIX 110 904 116 COLOUR_TEXT_REGION 110 904 116 904 50 HELIX 152 904 175 COLOUR_TEXT_REGION 152 904 175 904 50 STRAND 2 905 7 COLOUR_TEXT_REGION 2 905 7 905 51 STRAND 26 905 30 COLOUR_TEXT_REGION 26 905 30 905 51 STRAND 50 905 52 COLOUR_TEXT_REGION 50 905 52 905 51 STRAND 78 905 79 COLOUR_TEXT_REGION 78 905 79 905 51 STRAND 94 905 98 COLOUR_TEXT_REGION 94 905 98 905 51 STRAND 126 905 131 COLOUR_TEXT_REGION 126 905 131 905 51 STRAND 139 905 144 COLOUR_TEXT_REGION 139 905 144 905 51 STRAND 181 905 183 COLOUR_TEXT_REGION 181 905 183 905 51 STRAND 190 905 191 COLOUR_TEXT_REGION 190 905 191 905 51 HELIX 12 905 21 COLOUR_TEXT_REGION 12 905 21 905 50 HELIX 39 905 45 COLOUR_TEXT_REGION 39 905 45 905 50 HELIX 58 905 66 COLOUR_TEXT_REGION 58 905 66 905 50 HELIX 119 905 125 COLOUR_TEXT_REGION 119 905 125 905 50 HELIX 152 905 175 COLOUR_TEXT_REGION 152 905 175 905 50