SILENT_MODE BLOCK_FILE jp_m72hexw.concise.blc MAX_NSEQ 547 MAX_INPUT_LEN 549 OUTPUT_FILE jp_m72hexw.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 280 536 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 537 280 546 H SPACE SUB_CHARS 1 537 280 546 E SPACE SUB_CHARS 1 537 280 546 - SPACE STRAND 6 540 7 COLOUR_TEXT_REGION 6 540 7 540 51 STRAND 39 540 42 COLOUR_TEXT_REGION 39 540 42 540 51 STRAND 67 540 73 COLOUR_TEXT_REGION 67 540 73 540 51 STRAND 104 540 109 COLOUR_TEXT_REGION 104 540 109 540 51 STRAND 145 540 150 COLOUR_TEXT_REGION 145 540 150 540 51 STRAND 177 540 181 COLOUR_TEXT_REGION 177 540 181 540 51 STRAND 209 540 213 COLOUR_TEXT_REGION 209 540 213 540 51 STRAND 246 540 252 COLOUR_TEXT_REGION 246 540 252 540 51 HELIX 12 540 20 COLOUR_TEXT_REGION 12 540 20 540 50 HELIX 25 540 34 COLOUR_TEXT_REGION 25 540 34 540 50 HELIX 49 540 62 COLOUR_TEXT_REGION 49 540 62 540 50 HELIX 86 540 99 COLOUR_TEXT_REGION 86 540 99 540 50 HELIX 124 540 140 COLOUR_TEXT_REGION 124 540 140 540 50 HELIX 159 540 168 COLOUR_TEXT_REGION 159 540 168 540 50 HELIX 189 540 202 COLOUR_TEXT_REGION 189 540 202 540 50 HELIX 267 540 278 COLOUR_TEXT_REGION 267 540 278 540 50 STRAND 5 545 7 COLOUR_TEXT_REGION 5 545 7 545 51 STRAND 38 545 43 COLOUR_TEXT_REGION 38 545 43 545 51 STRAND 67 545 73 COLOUR_TEXT_REGION 67 545 73 545 51 STRAND 103 545 109 COLOUR_TEXT_REGION 103 545 109 545 51 STRAND 145 545 150 COLOUR_TEXT_REGION 145 545 150 545 51 STRAND 177 545 181 COLOUR_TEXT_REGION 177 545 181 545 51 STRAND 209 545 213 COLOUR_TEXT_REGION 209 545 213 545 51 STRAND 246 545 252 COLOUR_TEXT_REGION 246 545 252 545 51 HELIX 12 545 20 COLOUR_TEXT_REGION 12 545 20 545 50 HELIX 25 545 34 COLOUR_TEXT_REGION 25 545 34 545 50 HELIX 50 545 61 COLOUR_TEXT_REGION 50 545 61 545 50 HELIX 85 545 99 COLOUR_TEXT_REGION 85 545 99 545 50 HELIX 124 545 140 COLOUR_TEXT_REGION 124 545 140 545 50 HELIX 159 545 168 COLOUR_TEXT_REGION 159 545 168 545 50 HELIX 189 545 202 COLOUR_TEXT_REGION 189 545 202 545 50 HELIX 267 545 278 COLOUR_TEXT_REGION 267 545 278 545 50 STRAND 39 546 42 COLOUR_TEXT_REGION 39 546 42 546 51 STRAND 68 546 73 COLOUR_TEXT_REGION 68 546 73 546 51 STRAND 104 546 109 COLOUR_TEXT_REGION 104 546 109 546 51 STRAND 145 546 150 COLOUR_TEXT_REGION 145 546 150 546 51 STRAND 176 546 180 COLOUR_TEXT_REGION 176 546 180 546 51 STRAND 208 546 212 COLOUR_TEXT_REGION 208 546 212 546 51 STRAND 246 546 252 COLOUR_TEXT_REGION 246 546 252 546 51 HELIX 12 546 19 COLOUR_TEXT_REGION 12 546 19 546 50 HELIX 25 546 35 COLOUR_TEXT_REGION 25 546 35 546 50 HELIX 49 546 63 COLOUR_TEXT_REGION 49 546 63 546 50 HELIX 89 546 98 COLOUR_TEXT_REGION 89 546 98 546 50 HELIX 124 546 140 COLOUR_TEXT_REGION 124 546 140 546 50 HELIX 159 546 168 COLOUR_TEXT_REGION 159 546 168 546 50 HELIX 189 546 202 COLOUR_TEXT_REGION 189 546 202 546 50 HELIX 268 546 278 COLOUR_TEXT_REGION 268 546 278 546 50