SILENT_MODE BLOCK_FILE jp_SYcwqKA.concise.blc MAX_NSEQ 769 MAX_INPUT_LEN 771 OUTPUT_FILE jp_SYcwqKA.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 58 758 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 759 58 768 H SPACE SUB_CHARS 1 759 58 768 E SPACE SUB_CHARS 1 759 58 768 - SPACE STRAND 3 762 7 COLOUR_TEXT_REGION 3 762 7 762 51 STRAND 12 762 15 COLOUR_TEXT_REGION 12 762 15 762 51 STRAND 19 762 26 COLOUR_TEXT_REGION 19 762 26 762 51 STRAND 30 762 36 COLOUR_TEXT_REGION 30 762 36 762 51 STRAND 43 762 43 COLOUR_TEXT_REGION 43 762 43 762 51 HELIX 44 762 54 COLOUR_TEXT_REGION 44 762 54 762 50 STRAND 3 767 7 COLOUR_TEXT_REGION 3 767 7 767 51 STRAND 12 767 15 COLOUR_TEXT_REGION 12 767 15 767 51 STRAND 19 767 26 COLOUR_TEXT_REGION 19 767 26 767 51 STRAND 30 767 36 COLOUR_TEXT_REGION 30 767 36 767 51 STRAND 43 767 45 COLOUR_TEXT_REGION 43 767 45 767 51 HELIX 46 767 54 COLOUR_TEXT_REGION 46 767 54 767 50 STRAND 3 768 7 COLOUR_TEXT_REGION 3 768 7 768 51 STRAND 12 768 15 COLOUR_TEXT_REGION 12 768 15 768 51 STRAND 19 768 26 COLOUR_TEXT_REGION 19 768 26 768 51 STRAND 30 768 37 COLOUR_TEXT_REGION 30 768 37 768 51 HELIX 43 768 55 COLOUR_TEXT_REGION 43 768 55 768 50