SILENT_MODE BLOCK_FILE jp__1m4xMW.concise.blc MAX_NSEQ 850 MAX_INPUT_LEN 852 OUTPUT_FILE jp__1m4xMW.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 253 839 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 840 253 849 H SPACE SUB_CHARS 1 840 253 849 E SPACE SUB_CHARS 1 840 253 849 - SPACE STRAND 3 843 9 COLOUR_TEXT_REGION 3 843 9 843 51 STRAND 34 843 38 COLOUR_TEXT_REGION 34 843 38 843 51 STRAND 49 843 55 COLOUR_TEXT_REGION 49 843 55 843 51 STRAND 70 843 74 COLOUR_TEXT_REGION 70 843 74 843 51 STRAND 94 843 98 COLOUR_TEXT_REGION 94 843 98 843 51 STRAND 125 843 129 COLOUR_TEXT_REGION 125 843 129 843 51 STRAND 201 843 201 COLOUR_TEXT_REGION 201 843 201 843 51 HELIX 14 843 29 COLOUR_TEXT_REGION 14 843 29 843 50 HELIX 78 843 82 COLOUR_TEXT_REGION 78 843 82 843 50 HELIX 113 843 120 COLOUR_TEXT_REGION 113 843 120 843 50 HELIX 132 843 138 COLOUR_TEXT_REGION 132 843 138 843 50 HELIX 144 843 155 COLOUR_TEXT_REGION 144 843 155 843 50 HELIX 161 843 175 COLOUR_TEXT_REGION 161 843 175 843 50 HELIX 181 843 200 COLOUR_TEXT_REGION 181 843 200 843 50 HELIX 222 843 234 COLOUR_TEXT_REGION 222 843 234 843 50 STRAND 2 848 9 COLOUR_TEXT_REGION 2 848 9 848 51 STRAND 34 848 37 COLOUR_TEXT_REGION 34 848 37 848 51 STRAND 49 848 55 COLOUR_TEXT_REGION 49 848 55 848 51 STRAND 71 848 74 COLOUR_TEXT_REGION 71 848 74 848 51 STRAND 94 848 98 COLOUR_TEXT_REGION 94 848 98 848 51 STRAND 125 848 129 COLOUR_TEXT_REGION 125 848 129 848 51 HELIX 14 848 29 COLOUR_TEXT_REGION 14 848 29 848 50 HELIX 77 848 84 COLOUR_TEXT_REGION 77 848 84 848 50 HELIX 113 848 120 COLOUR_TEXT_REGION 113 848 120 848 50 HELIX 131 848 138 COLOUR_TEXT_REGION 131 848 138 848 50 HELIX 144 848 155 COLOUR_TEXT_REGION 144 848 155 848 50 HELIX 161 848 175 COLOUR_TEXT_REGION 161 848 175 848 50 HELIX 181 848 201 COLOUR_TEXT_REGION 181 848 201 848 50 HELIX 222 848 234 COLOUR_TEXT_REGION 222 848 234 848 50 STRAND 3 849 9 COLOUR_TEXT_REGION 3 849 9 849 51 STRAND 33 849 38 COLOUR_TEXT_REGION 33 849 38 849 51 STRAND 49 849 55 COLOUR_TEXT_REGION 49 849 55 849 51 STRAND 69 849 74 COLOUR_TEXT_REGION 69 849 74 849 51 STRAND 94 849 98 COLOUR_TEXT_REGION 94 849 98 849 51 STRAND 125 849 129 COLOUR_TEXT_REGION 125 849 129 849 51 STRAND 200 849 201 COLOUR_TEXT_REGION 200 849 201 849 51 STRAND 250 849 250 COLOUR_TEXT_REGION 250 849 250 849 51 HELIX 14 849 28 COLOUR_TEXT_REGION 14 849 28 849 50 HELIX 113 849 121 COLOUR_TEXT_REGION 113 849 121 849 50 HELIX 132 849 138 COLOUR_TEXT_REGION 132 849 138 849 50 HELIX 145 849 156 COLOUR_TEXT_REGION 145 849 156 849 50 HELIX 161 849 176 COLOUR_TEXT_REGION 161 849 176 849 50 HELIX 181 849 199 COLOUR_TEXT_REGION 181 849 199 849 50 HELIX 222 849 234 COLOUR_TEXT_REGION 222 849 234 849 50