QUERY : DDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAI : QUERY
UniRef90_V5Z4H3 : EAGAKDMMTELNKAEEALEKDPSNPAVLARYQAKLQEYTLFRNAQTSTVKAYKDIGAAI : UniRef90_V5Z4H3
UniRef90_X8LKC1 : DQGVKDLQGQIDEALKNLAARPSDPALLAQYQSKLSEYNLYRNAQSNTVKVFKDIDAAI : UniRef90_X8LKC1
UniRef90_W8V366 : EAGAKSMMDELKDAQKALEKDPSDPSVLANYQAKLQQYTLFRNAQTSTVKAYKDIGAAI : UniRef90_W8V366
UniRef90_S3IMC7 : DEGVTELNNELTDALTELTKDPSNPQLLAQYQSRLSEYTLYRNAQSNVVKVYKDVASAI : UniRef90_S3IMC7
UniRef90_Q7NVC1 : DQGVQDLHGAVEQALKDLSATPSDPKLLAKYQSKLSEYNLYRNAQSNAVKAFKDIDAAI : UniRef90_Q7NVC1
UniRef90_Q2NVJ2 : DTGAQTMMEQLETARKALSDAPDNPSVLAEFQAKLSEYTLFRNAQSSTVKTFKDIGAAI : UniRef90_Q2NVJ2
UniRef90_A2S1N1 : DDGVKDLNKQLQDAQANLTKNPSDPTALANYQMIMSEYNLYRNAQSSAVKSMKDIDSSI : UniRef90_A2S1N1
UniRef90_UPI0002DD7F98 : EAGAKDLKDKLDAALKALEGNASDPSLLAKYQSAFSSYTVFRNAQTNTIKGFKDIDMSI : UniRef90_UPI0002DD7F98
UniRef90_UPI000366E3B4 : EDGAKQLKEILDKALTELKDNPSDPGLLAAYQTAFSSYTVFRNVQTNTIKGFKDIDMS- : UniRef90_UPI000366E3B4
UniRef90_B2XU12 : DQGVDDLNQQVEKALEDLATNPSDPKFLAEYQSALAEYTLYRNAQSNVVKAYKDLDSAI : UniRef90_B2XU12
UniRef90_M3D592 : EQGTQDLRLSLDQALEVLQKDPSNPGNLAAYQSALSEYTLYKNAQSNVVKSFRDIDQGI : UniRef90_M3D592
UniRef90_D4IBA1 : EDGAKNMMLALNVAQANLELNPSDPSVLASYQAKLQEYTLFRNAQTSTIKAYKDIAAAI : UniRef90_D4IBA1
UniRef90_S6HA23 : EEGAKLLKVALDEALTKLQGDASDPGLLAAYQTAFSSYTVFRNAQTNTIKGFKDIDMAI : UniRef90_S6HA23
UniRef90_R9NLI1 : ETGSTNLMTELEKAQQALQQDPSNPSTLATYQSKLSAYTLFRSAQTAVVKAYKDVGSNI : UniRef90_R9NLI1
UniRef90_J0G5N4 : EDHAAKMMTDLTDAEAALEADPSNPSVLAKYQACLQEYTLFRNAQTTTLKVYKDIGAAI : UniRef90_J0G5N4
UniRef90_UPI0002892E23 : ESGAQDLKDILDRALATLKDDPSNPGLLASYQSAFSSYTVFRNVQTNTVKGFKDTSQTI : UniRef90_UPI0002892E23
UniRef90_UPI0002D6FC6B : EDGATDLKTKLDEALAALHADASDPTLLAAYQAAFSSYNVFRNVATNTVKGFKEIDTAI : UniRef90_UPI0002D6FC6B
UniRef90_V5Z7Q4 : ESGALDMMNALNAALEQLKQDPSNPSVLANYQSKLQEYTLFRGAQSSAVKAYGSIGKEI : UniRef90_V5Z7Q4
UniRef90_D2TZ28 : DNGVKEMNTALNNTLGELTKDPSNPMLLAKYQSLLSEYTLYRNLQSNVIKALKDVDNNI : UniRef90_D2TZ28
UniRef90_B2VEF9 : ESGAKNMMSELQSALEKLEADPSNPSVLANYQAKLQEYTLFRSAQSSTIKAYSSICKDI : UniRef90_B2VEF9
UniRef90_U1A9N9 : ---TTGLQKTVQDALDDLVASPSDPSLLAKYQSALSEYNLYRNAQSNVVKAFKDIDAAI : UniRef90_U1A9N9
UniRef90_UPI000464CDAF : -AGVGSLSSDLDAALATLQSDPSSPAALANYQAILSEYTMFRNAQSSAVKAMKDIDSDI : UniRef90_UPI000464CDAF
UniRef90_B1FB88 : DAGVGVLSTTLSQALSTLQTSPSDPNYLASYQEVMSDYNLYRNAQTSSVKAMKDIDSSI : UniRef90_B1FB88
UniRef90_D2UDE3 : -NGVGSLGSALTAAQQALEANPSDPAALASYQAVLSDYTIFRNAQSSAVKAMKDIDTTI : UniRef90_D2UDE3
UniRef90_F5MNT4 : -------------ALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAI : UniRef90_F5MNT4
UniRef90_UPI0004756D5D : -KGATDLNKKLKDALDKIRGNTSDPIALAEYQAALSAYTLFCNAQSSTIKAYKDIASA- : UniRef90_UPI0004756D5D
UniRef90_V5PX27 : DDKVSDLQERLQEAMEALKKDASDAVTLAHYQSVLGDYTTMRSAQSAAVKSMKEIAQG- : UniRef90_V5PX27
UniRef90_A0A024RJJ8 : ----GKLHTEEEKIRKEMESGASDPALLARYQAVTSELSIARNAQSSVIKMFKDVDSGI : UniRef90_A0A024RJJ8
UniRef90_S5U3E7 : ---VKTQSYELSEALEALKADTSNAAALAEYQAKLAEYNITRNAQSTSIKVIKDLAMSI : UniRef90_S5U3E7
UniRef90_C4S9D7 : ---VKELADELKTALSDKNNEMDNPIVLAKISALNGHYNGARQAQSNIMKSVKDTSQAI : UniRef90_C4S9D7
UniRef90_UPI000348F762 : DSRVVELNSELAAALLALQGDSSDPTLLAKYQSLSSDYQVYRQTQSSVVKSYKDVATAI : UniRef90_UPI000348F762
UniRef90_F4NJ61 : -------------------TNPSDTKFLAEYQSALAEYTLYRNAQSNVVKAYKDLDSAI : UniRef90_F4NJ61
UniRef90_V7YL90 : --------------------KTSDPALLAAYQSKLSEYNLYRNAQSNTVKVFKDIDAAI : UniRef90_V7YL90
UniRef90_D2TZU7 : -TKSSEYQTDINNAVERLKKDPSNSADLAEFQAAMAGYSILLNYISTTIKTHKENAQTI : UniRef90_D2TZU7
UniRef90_K1ILS7 : -------NEDVNKAIAAMEKNPDNPALLAELQHKINKWSVIYNINSTVTRAMKDLMQGI : UniRef90_K1ILS7
UniRef90_I8JSC3 : ---ADDANKAVNDSIAALKDKPDNPALLADLQHSINKWSVIYNINSTIVRSMKDLMQGI : UniRef90_I8JSC3
UniRef90_U1L066 : ----------LDSALADLKTDPNNPAKLANFQASVNEYSVVMSLVATVQKSIKDAMSTI : UniRef90_U1L066
UniRef90_C4K5N4 : ---------QYKTHLNALEKAPSDPVALSNVQRSLSALQMMINAQTNAIKKFTDNAMAI : UniRef90_C4K5N4
UniRef90_UPI00046A2B15 : ------------DAIAALKDSADNPALLAELQHKLNKWSVIYNINSTVTRSMRDLMQGI : UniRef90_UPI00046A2B15
UniRef90_U7QX38 : -TQANKANKDVNDAIAALNTKPDNPALLADLQHKINKWSVIYNINSTVTRSMKDLMQGI : UniRef90_U7QX38
UniRef90_U3AKN6 : ---AKEANEAVNTAIDNLSSSADDPSKLAELQHAINKWSVIYNIASTTTRSIKDVMQSI : UniRef90_U3AKN6
UniRef90_E3BLT1 : ---ANDASQDVNDKITALKNKPDDPALLAELQHSINKWTVTFNLSATTTRAIKDVMQSI : UniRef90_E3BLT1
UniRef90_Q699P8 : -----------------LKTSPDDPARLAELQHKINKWSVIYNINSTVTRAIKDMMQSI : UniRef90_Q699P8
UniRef90_UPI00030E4EA3 : ---SKTANEAVNTAIKNLETNADDPSKLAELQHTINKWSVVYNINATTTRAIKDVMQSI : UniRef90_UPI00030E4EA3
UniRef90_N9VDP5 : ---------------------PDNPALLAELQHKINKWSVVFNINSTVTRAMKDLMQGI : UniRef90_N9VDP5
UniRef90_P95434 : ---ANAANKDVNDAIKALQGNADNPALLAELQHKINKWSVIYNINSTVTRALRDLMQGI : UniRef90_P95434
UniRef90_K8WT23 : -SKAKQFGDELNTILADKTLEVDNPLVLAKITAMSGNYNMARQLQSNFMKSIKDTDQAL : UniRef90_K8WT23
UniRef90_D1P132 : ---TKTIADELKSMLDDKSLEVDNPLVLGKITALSGNYNMARQLQSNVMKSIKDAAQAI : UniRef90_D1P132
UniRef90_D2TXM8 : ---ADTTSEDVKTAIDALNTSPDNPALVAELQHKINKWSAIFNMNSTITRSMRDMIQSI : UniRef90_D2TXM8
UniRef90_C4UAQ1 : -DKVKALADELKTSLEN-TAELDNPLTLAKISALNGNYNGSRQLQSNLIKSLKDTSQAI : UniRef90_C4UAQ1
UniRef90_K8WJX0 : -ARAKDLADELDKILKGTELEVDNPLVLAKITALSGNYNMARQLQSNLMKSIKDTAQT- : UniRef90_K8WJX0
UniRef90_A0A034UQP2 : EDGAKNMMLALNVAQANLELNPSDPSVLASYQAS------------------------- : UniRef90_A0A034UQP2
UniRef90_I0DU12 : -NRAKEFADELKDILDGKTTTPDNPLTLGKITALSGSYNMARQLQSNLMKSIKDTAQAI : UniRef90_I0DU12
UniRef90_A8T5N5 : -----------------LSENADDPSKLAELQHTINKWSMIYNINATTTRAIKDVMQSI : UniRef90_A8T5N5
UniRef90_S2K134 : -------QDRVKAAMDALKATPDDPILLAQLQHEMNKYSHNFSLGSTMLKLYKDLFQS- : UniRef90_S2K134
UniRef90_L8JG82 : -QGLGKVMEAKDAELTRFSTDPRRPEDLLQFQKLVSEWSMVMGLQSATIKSVRDALQGI : UniRef90_L8JG82
UniRef90_C4UME6 : -------MEALAAAEKEMADNPTDPVAIVKFTQLSAEYNALRNIQSNTAKNLKDLVMTL : UniRef90_C4UME6
: 1---------11--------21--------31--------41--------51------- :
OrigSeq : DDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAI : OrigSeq
Jnet : --HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--- : Jnet
jhmm : --HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-- : jhmm
jpssm : -HHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH--- : jpssm
Lupas 14 : ----------------------------------------------------------- : Lupas 14
Lupas 21 : ----------------------------------------------------------- : Lupas 21
Lupas 28 : ----------------------------------------------------------- : Lupas 28
Jnet_25 : ---B--B---B--BB--B---B--B-BBB-BB-BB--B-B-B-B-BBBB-BB------- : Jnet_25
Jnet_5 : ---------------------------BB-B--------B-------B----------- : Jnet_5
Jnet_0 : ----------------------------------------------------------- : Jnet_0
Jnet Rel : 24799999999999998743888068999999987545889999999999999861499 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.