SILENT_MODE
BLOCK_FILE jp_GHJDxCu.concise.blc
MAX_NSEQ 145
MAX_INPUT_LEN 147
OUTPUT_FILE jp_GHJDxCu.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 43 134   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 135 43 144 H SPACE
SUB_CHARS 1 135 43 144 E SPACE
SUB_CHARS 1 135 43 144 - SPACE
STRAND 8 138 10
COLOUR_TEXT_REGION 8 138 10 138 51
STRAND 14 138 18
COLOUR_TEXT_REGION 14 138 18 138 51
STRAND 24 138 31
COLOUR_TEXT_REGION 24 138 31 138 51
STRAND 36 138 39
COLOUR_TEXT_REGION 36 138 39 138 51
STRAND 8 143 11
COLOUR_TEXT_REGION 8 143 11 143 51
STRAND 14 143 18
COLOUR_TEXT_REGION 14 143 18 143 51
STRAND 24 143 31
COLOUR_TEXT_REGION 24 143 31 143 51
STRAND 36 143 39
COLOUR_TEXT_REGION 36 143 39 143 51
STRAND 9 144 10
COLOUR_TEXT_REGION 9 144 10 144 51
STRAND 14 144 15
COLOUR_TEXT_REGION 14 144 15 144 51
STRAND 24 144 31
COLOUR_TEXT_REGION 24 144 31 144 51
STRAND 37 144 40
COLOUR_TEXT_REGION 37 144 40 144 51