SILENT_MODE BLOCK_FILE jp_FPLwpUH.concise.blc MAX_NSEQ 871 MAX_INPUT_LEN 873 OUTPUT_FILE jp_FPLwpUH.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 275 860 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 861 275 870 H SPACE SUB_CHARS 1 861 275 870 E SPACE SUB_CHARS 1 861 275 870 - SPACE STRAND 8 864 12 COLOUR_TEXT_REGION 8 864 12 864 51 STRAND 54 864 58 COLOUR_TEXT_REGION 54 864 58 864 51 STRAND 68 864 68 COLOUR_TEXT_REGION 68 864 68 864 51 STRAND 74 864 77 COLOUR_TEXT_REGION 74 864 77 864 51 STRAND 80 864 83 COLOUR_TEXT_REGION 80 864 83 864 51 STRAND 109 864 111 COLOUR_TEXT_REGION 109 864 111 864 51 STRAND 118 864 119 COLOUR_TEXT_REGION 118 864 119 864 51 STRAND 124 864 126 COLOUR_TEXT_REGION 124 864 126 864 51 STRAND 130 864 135 COLOUR_TEXT_REGION 130 864 135 864 51 STRAND 157 864 160 COLOUR_TEXT_REGION 157 864 160 864 51 STRAND 169 864 173 COLOUR_TEXT_REGION 169 864 173 864 51 STRAND 178 864 182 COLOUR_TEXT_REGION 178 864 182 864 51 STRAND 203 864 207 COLOUR_TEXT_REGION 203 864 207 864 51 STRAND 215 864 219 COLOUR_TEXT_REGION 215 864 219 864 51 STRAND 226 864 230 COLOUR_TEXT_REGION 226 864 230 864 51 STRAND 251 864 253 COLOUR_TEXT_REGION 251 864 253 864 51 STRAND 266 864 273 COLOUR_TEXT_REGION 266 864 273 864 51 HELIX 17 864 23 COLOUR_TEXT_REGION 17 864 23 864 50 HELIX 33 864 49 COLOUR_TEXT_REGION 33 864 49 864 50 HELIX 92 864 104 COLOUR_TEXT_REGION 92 864 104 864 50 HELIX 141 864 151 COLOUR_TEXT_REGION 141 864 151 864 50 HELIX 190 864 196 COLOUR_TEXT_REGION 190 864 196 864 50 HELIX 236 864 246 COLOUR_TEXT_REGION 236 864 246 864 50 HELIX 258 864 258 COLOUR_TEXT_REGION 258 864 258 864 50 STRAND 8 869 12 COLOUR_TEXT_REGION 8 869 12 869 51 STRAND 54 869 58 COLOUR_TEXT_REGION 54 869 58 869 51 STRAND 75 869 77 COLOUR_TEXT_REGION 75 869 77 869 51 STRAND 80 869 83 COLOUR_TEXT_REGION 80 869 83 869 51 STRAND 110 869 111 COLOUR_TEXT_REGION 110 869 111 869 51 STRAND 119 869 120 COLOUR_TEXT_REGION 119 869 120 869 51 STRAND 124 869 126 COLOUR_TEXT_REGION 124 869 126 869 51 STRAND 130 869 135 COLOUR_TEXT_REGION 130 869 135 869 51 STRAND 157 869 160 COLOUR_TEXT_REGION 157 869 160 869 51 STRAND 169 869 173 COLOUR_TEXT_REGION 169 869 173 869 51 STRAND 178 869 182 COLOUR_TEXT_REGION 178 869 182 869 51 STRAND 203 869 207 COLOUR_TEXT_REGION 203 869 207 869 51 STRAND 216 869 219 COLOUR_TEXT_REGION 216 869 219 869 51 STRAND 226 869 230 COLOUR_TEXT_REGION 226 869 230 869 51 STRAND 251 869 253 COLOUR_TEXT_REGION 251 869 253 869 51 STRAND 266 869 273 COLOUR_TEXT_REGION 266 869 273 869 51 HELIX 33 869 49 COLOUR_TEXT_REGION 33 869 49 869 50 HELIX 93 869 104 COLOUR_TEXT_REGION 93 869 104 869 50 HELIX 141 869 151 COLOUR_TEXT_REGION 141 869 151 869 50 HELIX 190 869 197 COLOUR_TEXT_REGION 190 869 197 869 50 HELIX 211 869 211 COLOUR_TEXT_REGION 211 869 211 869 50 HELIX 236 869 246 COLOUR_TEXT_REGION 236 869 246 869 50 STRAND 8 870 12 COLOUR_TEXT_REGION 8 870 12 870 51 STRAND 54 870 58 COLOUR_TEXT_REGION 54 870 58 870 51 STRAND 68 870 69 COLOUR_TEXT_REGION 68 870 69 870 51 STRAND 74 870 77 COLOUR_TEXT_REGION 74 870 77 870 51 STRAND 80 870 83 COLOUR_TEXT_REGION 80 870 83 870 51 STRAND 109 870 112 COLOUR_TEXT_REGION 109 870 112 870 51 STRAND 118 870 119 COLOUR_TEXT_REGION 118 870 119 870 51 STRAND 123 870 127 COLOUR_TEXT_REGION 123 870 127 870 51 STRAND 130 870 135 COLOUR_TEXT_REGION 130 870 135 870 51 STRAND 156 870 160 COLOUR_TEXT_REGION 156 870 160 870 51 STRAND 169 870 173 COLOUR_TEXT_REGION 169 870 173 870 51 STRAND 178 870 181 COLOUR_TEXT_REGION 178 870 181 870 51 STRAND 203 870 207 COLOUR_TEXT_REGION 203 870 207 870 51 STRAND 215 870 218 COLOUR_TEXT_REGION 215 870 218 870 51 STRAND 226 870 230 COLOUR_TEXT_REGION 226 870 230 870 51 STRAND 250 870 253 COLOUR_TEXT_REGION 250 870 253 870 51 STRAND 266 870 272 COLOUR_TEXT_REGION 266 870 272 870 51 HELIX 16 870 24 COLOUR_TEXT_REGION 16 870 24 870 50 HELIX 33 870 50 COLOUR_TEXT_REGION 33 870 50 870 50 HELIX 90 870 103 COLOUR_TEXT_REGION 90 870 103 870 50 HELIX 141 870 151 COLOUR_TEXT_REGION 141 870 151 870 50 HELIX 235 870 245 COLOUR_TEXT_REGION 235 870 245 870 50 HELIX 256 870 260 COLOUR_TEXT_REGION 256 870 260 870 50