SILENT_MODE BLOCK_FILE jp_CfMKKeq.concise.blc MAX_NSEQ 598 MAX_INPUT_LEN 600 OUTPUT_FILE jp_CfMKKeq.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 299 587 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 588 299 597 H SPACE SUB_CHARS 1 588 299 597 E SPACE SUB_CHARS 1 588 299 597 - SPACE STRAND 8 591 8 COLOUR_TEXT_REGION 8 591 8 591 51 STRAND 19 591 19 COLOUR_TEXT_REGION 19 591 19 591 51 STRAND 105 591 105 COLOUR_TEXT_REGION 105 591 105 591 51 HELIX 31 591 37 COLOUR_TEXT_REGION 31 591 37 591 50 HELIX 51 591 61 COLOUR_TEXT_REGION 51 591 61 591 50 HELIX 67 591 79 COLOUR_TEXT_REGION 67 591 79 591 50 HELIX 133 591 141 COLOUR_TEXT_REGION 133 591 141 591 50 HELIX 151 591 166 COLOUR_TEXT_REGION 151 591 166 591 50 HELIX 176 591 192 COLOUR_TEXT_REGION 176 591 192 591 50 HELIX 208 591 216 COLOUR_TEXT_REGION 208 591 216 591 50 HELIX 235 591 249 COLOUR_TEXT_REGION 235 591 249 591 50 STRAND 8 596 9 COLOUR_TEXT_REGION 8 596 9 596 51 STRAND 104 596 106 COLOUR_TEXT_REGION 104 596 106 596 51 STRAND 226 596 227 COLOUR_TEXT_REGION 226 596 227 596 51 STRAND 288 596 288 COLOUR_TEXT_REGION 288 596 288 596 51 HELIX 31 596 37 COLOUR_TEXT_REGION 31 596 37 596 50 HELIX 51 596 61 COLOUR_TEXT_REGION 51 596 61 596 50 HELIX 67 596 79 COLOUR_TEXT_REGION 67 596 79 596 50 HELIX 133 596 141 COLOUR_TEXT_REGION 133 596 141 596 50 HELIX 151 596 167 COLOUR_TEXT_REGION 151 596 167 596 50 HELIX 176 596 191 COLOUR_TEXT_REGION 176 596 191 596 50 HELIX 208 596 216 COLOUR_TEXT_REGION 208 596 216 596 50 HELIX 235 596 248 COLOUR_TEXT_REGION 235 596 248 596 50 STRAND 8 597 8 COLOUR_TEXT_REGION 8 597 8 597 51 STRAND 18 597 20 COLOUR_TEXT_REGION 18 597 20 597 51 HELIX 31 597 37 COLOUR_TEXT_REGION 31 597 37 597 50 HELIX 51 597 61 COLOUR_TEXT_REGION 51 597 61 597 50 HELIX 67 597 79 COLOUR_TEXT_REGION 67 597 79 597 50 HELIX 133 597 142 COLOUR_TEXT_REGION 133 597 142 597 50 HELIX 151 597 165 COLOUR_TEXT_REGION 151 597 165 597 50 HELIX 176 597 193 COLOUR_TEXT_REGION 176 597 193 597 50 HELIX 208 597 216 COLOUR_TEXT_REGION 208 597 216 597 50 HELIX 235 597 250 COLOUR_TEXT_REGION 235 597 250 597 50