SILENT_MODE BLOCK_FILE jp_bBL0YBF.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_bBL0YBF.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 218 12 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 13 218 22 H SPACE SUB_CHARS 1 13 218 22 E SPACE SUB_CHARS 1 13 218 22 - SPACE STRAND 15 16 18 COLOUR_TEXT_REGION 15 16 18 16 51 STRAND 24 16 26 COLOUR_TEXT_REGION 24 16 26 16 51 STRAND 30 16 36 COLOUR_TEXT_REGION 30 16 36 16 51 STRAND 41 16 46 COLOUR_TEXT_REGION 41 16 46 16 51 STRAND 64 16 69 COLOUR_TEXT_REGION 64 16 69 16 51 STRAND 74 16 78 COLOUR_TEXT_REGION 74 16 78 16 51 STRAND 82 16 82 COLOUR_TEXT_REGION 82 16 82 16 51 STRAND 100 16 102 COLOUR_TEXT_REGION 100 16 102 16 51 STRAND 106 16 109 COLOUR_TEXT_REGION 106 16 109 16 51 STRAND 114 16 117 COLOUR_TEXT_REGION 114 16 117 16 51 STRAND 141 16 143 COLOUR_TEXT_REGION 141 16 143 16 51 STRAND 155 16 157 COLOUR_TEXT_REGION 155 16 157 16 51 STRAND 180 16 187 COLOUR_TEXT_REGION 180 16 187 16 51 STRAND 191 16 192 COLOUR_TEXT_REGION 191 16 192 16 51 HELIX 7 16 14 COLOUR_TEXT_REGION 7 16 14 16 50 HELIX 51 16 57 COLOUR_TEXT_REGION 51 16 57 16 50 HELIX 83 16 93 COLOUR_TEXT_REGION 83 16 93 16 50 HELIX 118 16 123 COLOUR_TEXT_REGION 118 16 123 16 50 HELIX 125 16 135 COLOUR_TEXT_REGION 125 16 135 16 50 HELIX 161 16 167 COLOUR_TEXT_REGION 161 16 167 16 50 HELIX 193 16 195 COLOUR_TEXT_REGION 193 16 195 16 50 HELIX 207 16 216 COLOUR_TEXT_REGION 207 16 216 16 50 STRAND 15 21 19 COLOUR_TEXT_REGION 15 21 19 21 51 STRAND 24 21 26 COLOUR_TEXT_REGION 24 21 26 21 51 STRAND 30 21 36 COLOUR_TEXT_REGION 30 21 36 21 51 STRAND 41 21 47 COLOUR_TEXT_REGION 41 21 47 21 51 STRAND 64 21 69 COLOUR_TEXT_REGION 64 21 69 21 51 STRAND 74 21 78 COLOUR_TEXT_REGION 74 21 78 21 51 STRAND 100 21 102 COLOUR_TEXT_REGION 100 21 102 21 51 STRAND 106 21 109 COLOUR_TEXT_REGION 106 21 109 21 51 STRAND 114 21 117 COLOUR_TEXT_REGION 114 21 117 21 51 STRAND 141 21 143 COLOUR_TEXT_REGION 141 21 143 21 51 STRAND 155 21 157 COLOUR_TEXT_REGION 155 21 157 21 51 STRAND 180 21 187 COLOUR_TEXT_REGION 180 21 187 21 51 STRAND 191 21 193 COLOUR_TEXT_REGION 191 21 193 21 51 HELIX 7 21 14 COLOUR_TEXT_REGION 7 21 14 21 50 HELIX 51 21 57 COLOUR_TEXT_REGION 51 21 57 21 50 HELIX 81 21 91 COLOUR_TEXT_REGION 81 21 91 21 50 HELIX 118 21 122 COLOUR_TEXT_REGION 118 21 122 21 50 HELIX 126 21 135 COLOUR_TEXT_REGION 126 21 135 21 50 HELIX 161 21 167 COLOUR_TEXT_REGION 161 21 167 21 50 HELIX 207 21 216 COLOUR_TEXT_REGION 207 21 216 21 50 STRAND 14 22 17 COLOUR_TEXT_REGION 14 22 17 22 51 STRAND 23 22 26 COLOUR_TEXT_REGION 23 22 26 22 51 STRAND 30 22 35 COLOUR_TEXT_REGION 30 22 35 22 51 STRAND 41 22 46 COLOUR_TEXT_REGION 41 22 46 22 51 STRAND 64 22 69 COLOUR_TEXT_REGION 64 22 69 22 51 STRAND 74 22 78 COLOUR_TEXT_REGION 74 22 78 22 51 STRAND 82 22 84 COLOUR_TEXT_REGION 82 22 84 22 51 STRAND 106 22 109 COLOUR_TEXT_REGION 106 22 109 22 51 STRAND 114 22 116 COLOUR_TEXT_REGION 114 22 116 22 51 STRAND 142 22 144 COLOUR_TEXT_REGION 142 22 144 22 51 STRAND 155 22 156 COLOUR_TEXT_REGION 155 22 156 22 51 STRAND 180 22 187 COLOUR_TEXT_REGION 180 22 187 22 51 HELIX 7 22 13 COLOUR_TEXT_REGION 7 22 13 22 50 HELIX 50 22 57 COLOUR_TEXT_REGION 50 22 57 22 50 HELIX 85 22 102 COLOUR_TEXT_REGION 85 22 102 22 50 HELIX 117 22 135 COLOUR_TEXT_REGION 117 22 135 22 50 HELIX 161 22 167 COLOUR_TEXT_REGION 161 22 167 22 50 HELIX 172 22 173 COLOUR_TEXT_REGION 172 22 173 22 50 HELIX 192 22 196 COLOUR_TEXT_REGION 192 22 196 22 50 HELIX 206 22 216 COLOUR_TEXT_REGION 206 22 216 22 50