SILENT_MODE BLOCK_FILE jp_inoAUKX.concise.blc MAX_NSEQ 905 MAX_INPUT_LEN 907 OUTPUT_FILE jp_inoAUKX.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 539 894 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 895 539 904 H SPACE SUB_CHARS 1 895 539 904 E SPACE SUB_CHARS 1 895 539 904 - SPACE STRAND 4 898 5 COLOUR_TEXT_REGION 4 898 5 898 51 STRAND 35 898 40 COLOUR_TEXT_REGION 35 898 40 898 51 STRAND 45 898 48 COLOUR_TEXT_REGION 45 898 48 898 51 STRAND 73 898 77 COLOUR_TEXT_REGION 73 898 77 898 51 STRAND 98 898 99 COLOUR_TEXT_REGION 98 898 99 898 51 STRAND 120 898 124 COLOUR_TEXT_REGION 120 898 124 898 51 STRAND 144 898 148 COLOUR_TEXT_REGION 144 898 148 898 51 STRAND 188 898 192 COLOUR_TEXT_REGION 188 898 192 898 51 STRAND 203 898 206 COLOUR_TEXT_REGION 203 898 206 898 51 STRAND 232 898 236 COLOUR_TEXT_REGION 232 898 236 898 51 STRAND 257 898 260 COLOUR_TEXT_REGION 257 898 260 898 51 STRAND 280 898 282 COLOUR_TEXT_REGION 280 898 282 898 51 STRAND 306 898 310 COLOUR_TEXT_REGION 306 898 310 898 51 STRAND 331 898 334 COLOUR_TEXT_REGION 331 898 334 898 51 STRAND 344 898 347 COLOUR_TEXT_REGION 344 898 347 898 51 STRAND 359 898 360 COLOUR_TEXT_REGION 359 898 360 898 51 STRAND 365 898 371 COLOUR_TEXT_REGION 365 898 371 898 51 STRAND 383 898 389 COLOUR_TEXT_REGION 383 898 389 898 51 STRAND 413 898 415 COLOUR_TEXT_REGION 413 898 415 898 51 STRAND 419 898 423 COLOUR_TEXT_REGION 419 898 423 898 51 STRAND 427 898 433 COLOUR_TEXT_REGION 427 898 433 898 51 STRAND 437 898 440 COLOUR_TEXT_REGION 437 898 440 898 51 STRAND 461 898 467 COLOUR_TEXT_REGION 461 898 467 898 51 STRAND 475 898 483 COLOUR_TEXT_REGION 475 898 483 898 51 STRAND 511 898 516 COLOUR_TEXT_REGION 511 898 516 898 51 HELIX 19 898 29 COLOUR_TEXT_REGION 19 898 29 898 50 HELIX 49 898 65 COLOUR_TEXT_REGION 49 898 65 898 50 HELIX 82 898 94 COLOUR_TEXT_REGION 82 898 94 898 50 HELIX 97 898 97 COLOUR_TEXT_REGION 97 898 97 898 50 HELIX 107 898 115 COLOUR_TEXT_REGION 107 898 115 898 50 HELIX 128 898 137 COLOUR_TEXT_REGION 128 898 137 898 50 HELIX 162 898 169 COLOUR_TEXT_REGION 162 898 169 898 50 HELIX 208 898 222 COLOUR_TEXT_REGION 208 898 222 898 50 HELIX 239 898 254 COLOUR_TEXT_REGION 239 898 254 898 50 HELIX 266 898 275 COLOUR_TEXT_REGION 266 898 275 898 50 HELIX 285 898 293 COLOUR_TEXT_REGION 285 898 293 898 50 HELIX 317 898 326 COLOUR_TEXT_REGION 317 898 326 898 50 HELIX 401 898 408 COLOUR_TEXT_REGION 401 898 408 898 50 HELIX 447 898 455 COLOUR_TEXT_REGION 447 898 455 898 50 HELIX 491 898 500 COLOUR_TEXT_REGION 491 898 500 898 50 HELIX 526 898 536 COLOUR_TEXT_REGION 526 898 536 898 50 STRAND 4 903 5 COLOUR_TEXT_REGION 4 903 5 903 51 STRAND 35 903 40 COLOUR_TEXT_REGION 35 903 40 903 51 STRAND 45 903 48 COLOUR_TEXT_REGION 45 903 48 903 51 STRAND 73 903 77 COLOUR_TEXT_REGION 73 903 77 903 51 STRAND 98 903 99 COLOUR_TEXT_REGION 98 903 99 903 51 STRAND 120 903 124 COLOUR_TEXT_REGION 120 903 124 903 51 STRAND 144 903 148 COLOUR_TEXT_REGION 144 903 148 903 51 STRAND 188 903 192 COLOUR_TEXT_REGION 188 903 192 903 51 STRAND 203 903 204 COLOUR_TEXT_REGION 203 903 204 903 51 STRAND 232 903 236 COLOUR_TEXT_REGION 232 903 236 903 51 STRAND 257 903 260 COLOUR_TEXT_REGION 257 903 260 903 51 STRAND 280 903 282 COLOUR_TEXT_REGION 280 903 282 903 51 STRAND 306 903 310 COLOUR_TEXT_REGION 306 903 310 903 51 STRAND 331 903 334 COLOUR_TEXT_REGION 331 903 334 903 51 STRAND 344 903 347 COLOUR_TEXT_REGION 344 903 347 903 51 STRAND 358 903 360 COLOUR_TEXT_REGION 358 903 360 903 51 STRAND 366 903 371 COLOUR_TEXT_REGION 366 903 371 903 51 STRAND 383 903 389 COLOUR_TEXT_REGION 383 903 389 903 51 STRAND 419 903 423 COLOUR_TEXT_REGION 419 903 423 903 51 STRAND 427 903 433 COLOUR_TEXT_REGION 427 903 433 903 51 STRAND 437 903 440 COLOUR_TEXT_REGION 437 903 440 903 51 STRAND 461 903 467 COLOUR_TEXT_REGION 461 903 467 903 51 STRAND 475 903 483 COLOUR_TEXT_REGION 475 903 483 903 51 STRAND 511 903 517 COLOUR_TEXT_REGION 511 903 517 903 51 HELIX 19 903 29 COLOUR_TEXT_REGION 19 903 29 903 50 HELIX 49 903 65 COLOUR_TEXT_REGION 49 903 65 903 50 HELIX 82 903 94 COLOUR_TEXT_REGION 82 903 94 903 50 HELIX 97 903 97 COLOUR_TEXT_REGION 97 903 97 903 50 HELIX 107 903 115 COLOUR_TEXT_REGION 107 903 115 903 50 HELIX 128 903 137 COLOUR_TEXT_REGION 128 903 137 903 50 HELIX 163 903 171 COLOUR_TEXT_REGION 163 903 171 903 50 HELIX 205 903 220 COLOUR_TEXT_REGION 205 903 220 903 50 HELIX 239 903 255 COLOUR_TEXT_REGION 239 903 255 903 50 HELIX 266 903 275 COLOUR_TEXT_REGION 266 903 275 903 50 HELIX 284 903 294 COLOUR_TEXT_REGION 284 903 294 903 50 HELIX 317 903 326 COLOUR_TEXT_REGION 317 903 326 903 50 HELIX 401 903 408 COLOUR_TEXT_REGION 401 903 408 903 50 HELIX 447 903 455 COLOUR_TEXT_REGION 447 903 455 903 50 HELIX 491 903 500 COLOUR_TEXT_REGION 491 903 500 903 50 HELIX 526 903 537 COLOUR_TEXT_REGION 526 903 537 903 50 STRAND 4 904 6 COLOUR_TEXT_REGION 4 904 6 904 51 STRAND 35 904 40 COLOUR_TEXT_REGION 35 904 40 904 51 STRAND 45 904 48 COLOUR_TEXT_REGION 45 904 48 904 51 STRAND 73 904 77 COLOUR_TEXT_REGION 73 904 77 904 51 STRAND 98 904 100 COLOUR_TEXT_REGION 98 904 100 904 51 STRAND 120 904 124 COLOUR_TEXT_REGION 120 904 124 904 51 STRAND 143 904 148 COLOUR_TEXT_REGION 143 904 148 904 51 STRAND 188 904 192 COLOUR_TEXT_REGION 188 904 192 904 51 STRAND 202 904 206 COLOUR_TEXT_REGION 202 904 206 904 51 STRAND 232 904 236 COLOUR_TEXT_REGION 232 904 236 904 51 STRAND 258 904 260 COLOUR_TEXT_REGION 258 904 260 904 51 STRAND 280 904 282 COLOUR_TEXT_REGION 280 904 282 904 51 STRAND 306 904 311 COLOUR_TEXT_REGION 306 904 311 904 51 STRAND 331 904 334 COLOUR_TEXT_REGION 331 904 334 904 51 STRAND 344 904 347 COLOUR_TEXT_REGION 344 904 347 904 51 STRAND 360 904 361 COLOUR_TEXT_REGION 360 904 361 904 51 STRAND 365 904 371 COLOUR_TEXT_REGION 365 904 371 904 51 STRAND 383 904 389 COLOUR_TEXT_REGION 383 904 389 904 51 STRAND 413 904 416 COLOUR_TEXT_REGION 413 904 416 904 51 STRAND 418 904 422 COLOUR_TEXT_REGION 418 904 422 904 51 STRAND 427 904 433 COLOUR_TEXT_REGION 427 904 433 904 51 STRAND 436 904 440 COLOUR_TEXT_REGION 436 904 440 904 51 STRAND 460 904 467 COLOUR_TEXT_REGION 460 904 467 904 51 STRAND 475 904 483 COLOUR_TEXT_REGION 475 904 483 904 51 STRAND 511 904 516 COLOUR_TEXT_REGION 511 904 516 904 51 HELIX 19 904 29 COLOUR_TEXT_REGION 19 904 29 904 50 HELIX 49 904 65 COLOUR_TEXT_REGION 49 904 65 904 50 HELIX 82 904 94 COLOUR_TEXT_REGION 82 904 94 904 50 HELIX 97 904 97 COLOUR_TEXT_REGION 97 904 97 904 50 HELIX 107 904 116 COLOUR_TEXT_REGION 107 904 116 904 50 HELIX 129 904 137 COLOUR_TEXT_REGION 129 904 137 904 50 HELIX 161 904 166 COLOUR_TEXT_REGION 161 904 166 904 50 HELIX 209 904 224 COLOUR_TEXT_REGION 209 904 224 904 50 HELIX 240 904 254 COLOUR_TEXT_REGION 240 904 254 904 50 HELIX 266 904 275 COLOUR_TEXT_REGION 266 904 275 904 50 HELIX 285 904 293 COLOUR_TEXT_REGION 285 904 293 904 50 HELIX 317 904 326 COLOUR_TEXT_REGION 317 904 326 904 50 HELIX 401 904 408 COLOUR_TEXT_REGION 401 904 408 904 50 HELIX 447 904 455 COLOUR_TEXT_REGION 447 904 455 904 50 HELIX 491 904 500 COLOUR_TEXT_REGION 491 904 500 904 50 HELIX 525 904 536 COLOUR_TEXT_REGION 525 904 536 904 50