SILENT_MODE
BLOCK_FILE jp_wECS1dh.concise.blc
MAX_NSEQ 367
MAX_INPUT_LEN 369
OUTPUT_FILE jp_wECS1dh.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 119 356   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 357 119 366 H SPACE
SUB_CHARS 1 357 119 366 E SPACE
SUB_CHARS 1 357 119 366 - SPACE
STRAND 5 360 9
COLOUR_TEXT_REGION 5 360 9 360 51
STRAND 42 360 47
COLOUR_TEXT_REGION 42 360 47 360 51
STRAND 50 360 50
COLOUR_TEXT_REGION 50 360 50 360 51
STRAND 59 360 60
COLOUR_TEXT_REGION 59 360 60 360 51
STRAND 63 360 70
COLOUR_TEXT_REGION 63 360 70 360 51
STRAND 103 360 107
COLOUR_TEXT_REGION 103 360 107 360 51
HELIX 15 360 34
COLOUR_TEXT_REGION 15 360 34 360 50
HELIX 84 360 97
COLOUR_TEXT_REGION 84 360 97 360 50
STRAND 5 365 9
COLOUR_TEXT_REGION 5 365 9 365 51
STRAND 43 365 50
COLOUR_TEXT_REGION 43 365 50 365 51
STRAND 58 365 60
COLOUR_TEXT_REGION 58 365 60 365 51
STRAND 63 365 70
COLOUR_TEXT_REGION 63 365 70 365 51
STRAND 103 365 107
COLOUR_TEXT_REGION 103 365 107 365 51
HELIX 16 365 36
COLOUR_TEXT_REGION 16 365 36 365 50
HELIX 84 365 97
COLOUR_TEXT_REGION 84 365 97 365 50
STRAND 5 366 9
COLOUR_TEXT_REGION 5 366 9 366 51
STRAND 41 366 45
COLOUR_TEXT_REGION 41 366 45 366 51
STRAND 50 366 50
COLOUR_TEXT_REGION 50 366 50 366 51
STRAND 62 366 71
COLOUR_TEXT_REGION 62 366 71 366 51
STRAND 102 366 107
COLOUR_TEXT_REGION 102 366 107 366 51
HELIX 14 366 33
COLOUR_TEXT_REGION 14 366 33 366 50
HELIX 84 366 97
COLOUR_TEXT_REGION 84 366 97 366 50