SILENT_MODE BLOCK_FILE jp_kt3JrIu.concise.blc MAX_NSEQ 427 MAX_INPUT_LEN 429 OUTPUT_FILE jp_kt3JrIu.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 162 416 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 417 162 426 H SPACE SUB_CHARS 1 417 162 426 E SPACE SUB_CHARS 1 417 162 426 - SPACE STRAND 147 420 150 COLOUR_TEXT_REGION 147 420 150 420 51 HELIX 3 420 24 COLOUR_TEXT_REGION 3 420 24 420 50 HELIX 37 420 49 COLOUR_TEXT_REGION 37 420 49 420 50 HELIX 59 420 67 COLOUR_TEXT_REGION 59 420 67 420 50 HELIX 72 420 80 COLOUR_TEXT_REGION 72 420 80 420 50 HELIX 90 420 114 COLOUR_TEXT_REGION 90 420 114 420 50 HELIX 134 420 142 COLOUR_TEXT_REGION 134 420 142 420 50 STRAND 147 425 152 COLOUR_TEXT_REGION 147 425 152 425 51 HELIX 3 425 23 COLOUR_TEXT_REGION 3 425 23 425 50 HELIX 37 425 49 COLOUR_TEXT_REGION 37 425 49 425 50 HELIX 59 425 66 COLOUR_TEXT_REGION 59 425 66 425 50 HELIX 73 425 80 COLOUR_TEXT_REGION 73 425 80 425 50 HELIX 90 425 102 COLOUR_TEXT_REGION 90 425 102 425 50 HELIX 104 425 114 COLOUR_TEXT_REGION 104 425 114 425 50 HELIX 117 425 119 COLOUR_TEXT_REGION 117 425 119 425 50 HELIX 134 425 142 COLOUR_TEXT_REGION 134 425 142 425 50 STRAND 147 426 150 COLOUR_TEXT_REGION 147 426 150 426 51 HELIX 2 426 24 COLOUR_TEXT_REGION 2 426 24 426 50 HELIX 36 426 50 COLOUR_TEXT_REGION 36 426 50 426 50 HELIX 60 426 68 COLOUR_TEXT_REGION 60 426 68 426 50 HELIX 72 426 81 COLOUR_TEXT_REGION 72 426 81 426 50 HELIX 89 426 113 COLOUR_TEXT_REGION 89 426 113 426 50 HELIX 134 426 142 COLOUR_TEXT_REGION 134 426 142 426 50